Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 2
- extracellular 1
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0565000-01 | |
| Os04t0445600-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G00585.1 | Os02t0565000-01 | AT1G54060.1 | 21798944 |
| AT4G00585.1 | Os04t0445600-00 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99354 | Sorghum | cytosol, mitochondrion, peroxisome | 95.18 | 96.34 |
| Zm00001d006336_P001 | Maize | cytosol | 93.98 | 96.3 |
| TraesCS5D01G373000.1 | Wheat | cytosol | 93.98 | 93.98 |
| TraesCS5B01G366000.1 | Wheat | cytosol | 93.98 | 93.98 |
| TraesCS5A01G364100.1 | Wheat | cytosol | 93.98 | 93.98 |
| HORVU5Hr1G089380.1 | Barley | cytosol | 93.98 | 93.98 |
| GSMUA_Achr8P03520_001 | Banana | mitochondrion | 66.27 | 88.71 |
| VIT_16s0100g01290.t01 | Wine grape | cytosol | 80.72 | 83.75 |
| GSMUA_Achr9P25090_001 | Banana | cytosol | 84.34 | 80.46 |
| VIT_15s0046g03680.t01 | Wine grape | cytosol | 79.52 | 79.52 |
| CDY51150 | Canola | cytosol | 78.31 | 76.47 |
| Bra037348.1-P | Field mustard | extracellular, golgi, mitochondrion | 78.31 | 76.47 |
| KRH00688 | Soybean | cytosol | 80.72 | 76.14 |
| KRH40506 | Soybean | cytosol | 81.93 | 75.56 |
| CDX74341 | Canola | cytosol | 75.9 | 75.0 |
| Bra000966.1-P | Field mustard | cytosol, extracellular, mitochondrion | 77.11 | 74.42 |
| PGSC0003DMT400037074 | Potato | cytosol | 72.29 | 74.07 |
| Solyc03g025910.2.1 | Tomato | cytosol | 72.29 | 74.07 |
| AT4G00585.1 | Thale cress | cytosol | 77.11 | 72.73 |
| CDY31618 | Canola | cytosol | 75.9 | 72.41 |
| Bra017857.1-P | Field mustard | cytosol, extracellular, mitochondrion | 74.7 | 71.26 |
| CDX91903 | Canola | cytosol, extracellular, golgi | 74.7 | 62.63 |
| CDX72659 | Canola | mitochondrion, nucleus | 77.11 | 44.44 |
| CDY07208 | Canola | extracellular, golgi, plasma membrane | 61.45 | 38.35 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4347849 | EMBL:AK099388 | EMBL:AK112051 | ProteinID:BAD45960.1 | ProteinID:BAD46075.1 |
| ProteinID:BAF25839.1 | ProteinID:BAT09396.1 | ProteinID:EEE70216.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0016020 | GO:GO:0031966 | GO:GO:0045271 |
| EnsemblPlantsGene:Os09g0560300 | EnsemblPlants:Os09t0560300-01 | PANTHER:PTHR34286 | PANTHER:PTHR34286:SF3 | UniProt:Q653E2 | UniParc:UPI000043A469 |
| RefSeq:XP_015612483.1 | SEG:seg | : | : | : | : |
Description
Conserved hypothetical protein. (Os09t0560300-01)
Coordinates
chr9:-:22262209..22264375
Molecular Weight (calculated)
9357.4 Da
IEP (calculated)
10.180
GRAVY (calculated)
-0.505
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGDHGGHGH GGGDFRQKVW SMTGGPYCRP VHWRRNTAIA MFGVFLVCIP IAMKSAELEQ RPHHPVRPIP SQLWCKNFGK KEY
1: MGGGDHGHGA EGGDFRAKVW SMTGGPNCRP KHWRRNTAIA MFGVFLVCIP IAKLSAKLEQ RPHMPVRPIP SQIWCKNFGT KDDYEKEH
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.