Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31618 | Canola | cytosol | 85.23 | 86.21 |
| CDX74341 | Canola | cytosol | 81.82 | 85.71 |
| Bra017857.1-P | Field mustard | cytosol, extracellular, mitochondrion | 82.95 | 83.91 |
| Bra000966.1-P | Field mustard | cytosol, extracellular, mitochondrion | 81.82 | 83.72 |
| VIT_16s0100g01290.t01 | Wine grape | cytosol | 75.0 | 82.5 |
| Bra037348.1-P | Field mustard | extracellular, golgi, mitochondrion | 79.55 | 82.35 |
| CDY51150 | Canola | cytosol | 79.55 | 82.35 |
| GSMUA_Achr8P03520_001 | Banana | mitochondrion | 55.68 | 79.03 |
| Zm00001d006336_P001 | Maize | cytosol | 72.73 | 79.01 |
| EER99354 | Sorghum | cytosol, mitochondrion, peroxisome | 72.73 | 78.05 |
| Os09t0560300-01 | Rice | cytosol, plasma membrane, plastid | 72.73 | 77.11 |
| HORVU5Hr1G089380.1 | Barley | cytosol | 71.59 | 75.9 |
| VIT_15s0046g03680.t01 | Wine grape | cytosol | 71.59 | 75.9 |
| TraesCS5D01G373000.1 | Wheat | cytosol | 71.59 | 75.9 |
| TraesCS5B01G366000.1 | Wheat | cytosol | 71.59 | 75.9 |
| TraesCS5A01G364100.1 | Wheat | cytosol | 71.59 | 75.9 |
| PGSC0003DMT400037074 | Potato | cytosol | 68.18 | 74.07 |
| Solyc03g025910.2.1 | Tomato | cytosol | 68.18 | 74.07 |
| KRH00688 | Soybean | cytosol | 73.86 | 73.86 |
| KRH40506 | Soybean | cytosol | 75.0 | 73.33 |
| GSMUA_Achr9P25090_001 | Banana | cytosol | 71.59 | 72.41 |
| CDX91903 | Canola | cytosol, extracellular, golgi | 71.59 | 63.64 |
| Zm00001d021375_P002 | Maize | cytosol, extracellular, golgi | 52.27 | 54.76 |
| CDX72659 | Canola | mitochondrion, nucleus | 81.82 | 50.0 |
| CDY07208 | Canola | extracellular, golgi, plasma membrane | 53.41 | 35.34 |
| HORVU0Hr1G013700.1 | Barley | cytosol, mitochondrion | 47.73 | 31.82 |
Protein Annotations
| MapMan:35.2 | EntrezGene:828026 | ProteinID:AEE81905.1 | EMBL:AK118700 | ArrayExpress:AT4G00585 | EnsemblPlantsGene:AT4G00585 |
| RefSeq:AT4G00585 | TAIR:AT4G00585 | RefSeq:AT4G00585-TAIR-G | EnsemblPlants:AT4G00585.1 | TAIR:AT4G00585.1 | EMBL:AY063842 |
| EMBL:AY091239 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005747 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009853 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0031966 | GO:GO:0045271 | RefSeq:NP_567180.1 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR34286 | PANTHER:PTHR34286:SF3 | UniProt:Q8VZT9 | TMHMM:TMhelix | UniParc:UPI00000AC2FC |
| SEG:seg | : | : | : | : | : |
Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZT9]
Coordinates
chr4:-:250840..252598
Molecular Weight (calculated)
9858.9 Da
IEP (calculated)
9.892
GRAVY (calculated)
-0.592
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGGDHGHGA EGGDFRAKVW SMTGGPNCRP KHWRRNTAIA MFGVFLVCIP IAKLSAKLEQ RPHMPVRPIP SQIWCKNFGT KDDYEKEH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.