Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 3
- plastid 1
- extracellular 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra014370.1-P | |
| Bra030909.1-P | |
| Bra037960.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G00585.1 | Bra014370.1-P | AT1G54060.1 | 21798944 |
| AT4G00585.1 | Bra030909.1-P | AT1G54060.1 | 21798944 |
| AT4G00585.1 | Bra037960.1-P | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31618 | Canola | cytosol | 97.7 | 97.7 |
| Bra000966.1-P | Field mustard | cytosol, extracellular, mitochondrion | 89.66 | 90.7 |
| Bra037348.1-P | Field mustard | extracellular, golgi, mitochondrion | 87.36 | 89.41 |
| AT4G00585.1 | Thale cress | cytosol | 83.91 | 82.95 |
| GSMUA_Achr8P03520_001 | Banana | mitochondrion | 56.32 | 79.03 |
| VIT_16s0100g01290.t01 | Wine grape | cytosol | 72.41 | 78.75 |
| VIT_15s0046g03680.t01 | Wine grape | cytosol | 73.56 | 77.11 |
| Zm00001d006336_P001 | Maize | cytosol | 71.26 | 76.54 |
| EER99354 | Sorghum | cytosol, mitochondrion, peroxisome | 71.26 | 75.61 |
| Os09t0560300-01 | Rice | cytosol, plasma membrane, plastid | 71.26 | 74.7 |
| HORVU5Hr1G089380.1 | Barley | cytosol | 70.11 | 73.49 |
| TraesCS5A01G364100.1 | Wheat | cytosol | 70.11 | 73.49 |
| TraesCS5B01G366000.1 | Wheat | cytosol | 70.11 | 73.49 |
| TraesCS5D01G373000.1 | Wheat | cytosol | 70.11 | 73.49 |
| PGSC0003DMT400037074 | Potato | cytosol | 67.82 | 72.84 |
| Solyc03g025910.2.1 | Tomato | cytosol | 67.82 | 72.84 |
| KRH00688 | Soybean | cytosol | 73.56 | 72.73 |
| GSMUA_Achr9P25090_001 | Banana | cytosol | 72.41 | 72.41 |
| KRH40506 | Soybean | cytosol | 74.71 | 72.22 |
| Zm00001d021375_P002 | Maize | cytosol, extracellular, golgi | 50.57 | 52.38 |
| HORVU0Hr1G013700.1 | Barley | cytosol, mitochondrion | 51.72 | 34.09 |
Protein Annotations
Description
AT4G00585 (E=2e-038) | unknown protein
Coordinates
chrA03:+:31035170..31035644
Molecular Weight (calculated)
9831.9 Da
IEP (calculated)
9.358
GRAVY (calculated)
-0.571
Length
87 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGAEHGDGH GGGFRAKVWS MSGGPYCRPK HWRRNTAFAM FGVFLVCIPI AMKSAELEQR PHMPVRPIPS QIWCKNFGTK DDYEKEH
1: MGGGDHGHGA EGGDFRAKVW SMTGGPNCRP KHWRRNTAIA MFGVFLVCIP IAKLSAKLEQ RPHMPVRPIP SQIWCKNFGT KDDYEKEH
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.