Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G360600.1 | Wheat | mitochondrion | 95.62 | 95.62 |
| TraesCS4A01G360300.1 | Wheat | golgi, mitochondrion, vacuole | 63.75 | 95.33 |
| TraesCS6A01G114500.1 | Wheat | mitochondrion | 93.12 | 92.55 |
| TraesCS3A01G456900.1 | Wheat | golgi, mitochondrion, vacuole | 92.5 | 91.93 |
| TraesCS6A01G397300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 82.5 | 91.67 |
| Zm00001d046083_P001 | Maize | mitochondrion | 91.88 | 91.3 |
| TraesCS7A01G080700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 91.25 | 90.68 |
| TraesCS7A01G388200.1 | Wheat | golgi | 81.25 | 90.28 |
| TraesCS1A01G098600.1 | Wheat | mitochondrion | 81.25 | 90.28 |
| AT2G07785.1 | Thale cress | golgi, mitochondrion, plastid, vacuole | 55.62 | 89.9 |
| VIT_00s0396g00020.t01 | Wine grape | plastid | 55.0 | 88.89 |
| TraesCS4A01G069900.1 | Wheat | golgi, mitochondrion, vacuole | 87.5 | 86.96 |
| GSMUA_AchrUn_... | Banana | golgi | 63.12 | 82.11 |
| Solyc05g023920.1.1 | Tomato | plastid | 47.5 | 76.77 |
| ATMG01275.1 | Thale cress | endoplasmic reticulum | 55.62 | 68.99 |
| CDY45488 | Canola | golgi, mitochondrion, nucleus, plastid | 63.75 | 64.15 |
| CDY36712 | Canola | golgi, mitochondrion, nucleus, plastid | 63.75 | 64.15 |
| TraesCS3A01G430400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 25.62 | 21.93 |
| TraesCS4A01G155400.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS3A01G430300.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS5A01G056300.1 | Wheat | extracellular, plasma membrane | 0.0 | 0.0 |
| TraesCS1A01G130500.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS7A01G290700.1 | Wheat | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G360500.1 | EnsemblPlantsGene:TraesCS4A01G360500 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0055114 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | InterPro:NADH_UbQ_OxRdtase_su1_CS | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | PFAM:PF00146 |
| ScanProsite:PS00667 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:633468260..633468745
Molecular Weight (calculated)
17505.5 Da
IEP (calculated)
10.565
GRAVY (calculated)
0.352
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVQRRKSP DVVGSFGLLQ PLADGFKLIL KEPISPSSAN FSLFRMAPVA TFMLSLVAWA IVPFDYGMVL SDPKIGVYLF AISSLGVYGI IIAGWSSKTG
101: GGRSVAYDVW TNWSKWVCAV GVERSTLHRC GLTGLGLINP FFHSSRGRPL FRAGIEKWKS
101: GGRSVAYDVW TNWSKWVCAV GVERSTLHRC GLTGLGLINP FFHSSRGRPL FRAGIEKWKS
1: MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGRSSN
Arabidopsis Description
NADH dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q3EC42]
SUBAcon: [mitochondrion,golgi,plastid,vacuole]
SUBAcon: [mitochondrion,golgi,plastid,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.