Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- extracellular 3
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G07785.1 | Thale cress | golgi, mitochondrion, plastid, vacuole | 76.74 | 100.0 |
| VIT_00s0396g00020.t01 | Wine grape | plastid | 74.42 | 96.97 |
| HORVU4Hr1G052660.1 | Barley | golgi, mitochondrion, vacuole | 72.87 | 92.16 |
| HORVU2Hr1G004300.1 | Barley | golgi, mitochondrion, plastid, vacuole | 69.77 | 88.24 |
| HORVU3Hr1G044940.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 36.43 | 82.46 |
| TraesCS4A01G360300.1 | Wheat | golgi, mitochondrion, vacuole | 68.22 | 82.24 |
| HORVU6Hr1G039110.1 | Barley | extracellular, golgi, vacuole | 21.71 | 80.0 |
| Solyc05g023920.1.1 | Tomato | plastid | 60.47 | 78.79 |
| HORVU0Hr1G019930.1 | Barley | golgi, mitochondrion, vacuole | 72.87 | 76.42 |
| GSMUA_AchrUn_... | Banana | golgi | 72.09 | 75.61 |
| TraesCSU01G173300.1 | Wheat | golgi, mitochondrion, vacuole | 72.87 | 65.28 |
| TraesCS7B01G486900.1 | Wheat | golgi, mitochondrion, vacuole | 72.87 | 65.28 |
| TraesCS7A01G388200.1 | Wheat | golgi | 72.87 | 65.28 |
| TraesCSU01G180100.1 | Wheat | golgi, mitochondrion, vacuole | 72.87 | 65.28 |
| TraesCS3D01G173600.1 | Wheat | golgi, mitochondrion, vacuole | 72.87 | 65.28 |
| TraesCS3B01G013800.1 | Wheat | golgi, mitochondrion, vacuole | 72.87 | 65.28 |
| TraesCS6B01G338500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 71.32 | 63.89 |
| TraesCS5B01G339500.1 | Wheat | mitochondrion | 71.32 | 63.89 |
| TraesCS1A01G098600.1 | Wheat | mitochondrion | 71.32 | 63.89 |
| TraesCS6A01G397300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 70.54 | 63.19 |
| CDY36712 | Canola | golgi, mitochondrion, nucleus, plastid | 75.97 | 61.64 |
| CDY45488 | Canola | golgi, mitochondrion, nucleus, plastid | 75.97 | 61.64 |
| TraesCS4A01G069900.1 | Wheat | golgi, mitochondrion, vacuole | 72.87 | 58.39 |
| TraesCS3A01G456900.1 | Wheat | golgi, mitochondrion, vacuole | 72.09 | 57.76 |
| TraesCS2D01G247600.1 | Wheat | golgi, mitochondrion, vacuole | 71.32 | 57.14 |
| TraesCS6A01G114500.1 | Wheat | mitochondrion | 71.32 | 57.14 |
| TraesCS2B01G064500.1 | Wheat | golgi, mitochondrion, vacuole | 70.54 | 56.88 |
| TraesCS5D01G214900.1 | Wheat | mitochondrion | 70.54 | 56.52 |
| TraesCS4B01G117500.1 | Wheat | golgi, mitochondrion, vacuole | 70.54 | 56.52 |
| TraesCS7A01G080700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 70.54 | 56.52 |
| TraesCS1D01G258700.1 | Wheat | mitochondrion | 70.54 | 56.52 |
| TraesCS4D01G138500.1 | Wheat | mitochondrion | 69.77 | 55.9 |
| TraesCS4A01G360600.1 | Wheat | mitochondrion | 68.99 | 55.62 |
| TraesCS4A01G360500.1 | Wheat | golgi, mitochondrion, vacuole | 68.99 | 55.62 |
| Zm00001d046083_P001 | Maize | mitochondrion | 68.99 | 55.28 |
| TraesCS5B01G030900.1 | Wheat | mitochondrion | 68.99 | 55.28 |
| BAC19852 | Rice | plasma membrane | 95.35 | 37.85 |
| ATCG01100.1 | Thale cress | plasma membrane | 37.21 | 13.33 |
Protein Annotations
| MapMan:35.1 | ArrayExpress:ATMG01275 | EnsemblPlantsGene:ATMG01275 | RefSeq:ATMG01275 | TAIR:ATMG01275 | RefSeq:ATMG01275-TAIR-G |
| EnsemblPlants:ATMG01275.1 | TAIR:ATMG01275.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0005886 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009853 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0031966 | GO:GO:0045271 | GO:GO:0055114 | Symbol:NAD1A | InterPro:NADH_UbQ_OxRdtase_su1/FPO |
| PFAM:PF00146 | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | TMHMM:TMhelix | UniParc:UPI0008DB34B6 | SEG:seg |
Description
NAD1ANADH dehydrogenase 1A [Source:TAIR;Acc:ATMG01275]
Coordinates
chrMt:-:318004..318390
Molecular Weight (calculated)
13799.4 Da
IEP (calculated)
9.912
GRAVY (calculated)
0.911
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: TYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.