Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0396g00020.t01 | Wine grape | plastid | 96.97 | 96.97 |
| HORVU4Hr1G052660.1 | Barley | golgi, mitochondrion, vacuole | 94.95 | 92.16 |
| HORVU2Hr1G004300.1 | Barley | golgi, mitochondrion, plastid, vacuole | 90.91 | 88.24 |
| HORVU3Hr1G044940.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 47.47 | 82.46 |
| TraesCS4A01G360300.1 | Wheat | golgi, mitochondrion, vacuole | 88.89 | 82.24 |
| HORVU6Hr1G039110.1 | Barley | extracellular, golgi, vacuole | 28.28 | 80.0 |
| Solyc05g023920.1.1 | Tomato | plastid | 78.79 | 78.79 |
| ATMG01275.1 | Thale cress | endoplasmic reticulum | 100.0 | 76.74 |
| HORVU0Hr1G019930.1 | Barley | golgi, mitochondrion, vacuole | 94.95 | 76.42 |
| GSMUA_AchrUn_... | Banana | golgi | 93.94 | 75.61 |
| TraesCSU01G180100.1 | Wheat | golgi, mitochondrion, vacuole | 94.95 | 65.28 |
| TraesCSU01G173300.1 | Wheat | golgi, mitochondrion, vacuole | 94.95 | 65.28 |
| TraesCS7B01G486900.1 | Wheat | golgi, mitochondrion, vacuole | 94.95 | 65.28 |
| TraesCS7A01G388200.1 | Wheat | golgi | 94.95 | 65.28 |
| TraesCS3B01G013800.1 | Wheat | golgi, mitochondrion, vacuole | 94.95 | 65.28 |
| TraesCS3D01G173600.1 | Wheat | golgi, mitochondrion, vacuole | 94.95 | 65.28 |
| TraesCS1A01G098600.1 | Wheat | mitochondrion | 92.93 | 63.89 |
| TraesCS6B01G338500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 92.93 | 63.89 |
| TraesCS5B01G339500.1 | Wheat | mitochondrion | 92.93 | 63.89 |
| TraesCS6A01G397300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 91.92 | 63.19 |
| CDY45488 | Canola | golgi, mitochondrion, nucleus, plastid | 98.99 | 61.64 |
| CDY36712 | Canola | golgi, mitochondrion, nucleus, plastid | 98.99 | 61.64 |
| TraesCS4A01G069900.1 | Wheat | golgi, mitochondrion, vacuole | 94.95 | 58.39 |
| TraesCS3A01G456900.1 | Wheat | golgi, mitochondrion, vacuole | 93.94 | 57.76 |
| TraesCS6A01G114500.1 | Wheat | mitochondrion | 92.93 | 57.14 |
| TraesCS2D01G247600.1 | Wheat | golgi, mitochondrion, vacuole | 92.93 | 57.14 |
| TraesCS2B01G064500.1 | Wheat | golgi, mitochondrion, vacuole | 91.92 | 56.88 |
| TraesCS4B01G117500.1 | Wheat | golgi, mitochondrion, vacuole | 91.92 | 56.52 |
| TraesCS5D01G214900.1 | Wheat | mitochondrion | 91.92 | 56.52 |
| TraesCS7A01G080700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 91.92 | 56.52 |
| TraesCS1D01G258700.1 | Wheat | mitochondrion | 91.92 | 56.52 |
| TraesCS4D01G138500.1 | Wheat | mitochondrion | 90.91 | 55.9 |
| TraesCS4A01G360600.1 | Wheat | mitochondrion | 89.9 | 55.62 |
| TraesCS4A01G360500.1 | Wheat | golgi, mitochondrion, vacuole | 89.9 | 55.62 |
| TraesCS5B01G030900.1 | Wheat | mitochondrion | 89.9 | 55.28 |
| Zm00001d046083_P001 | Maize | mitochondrion | 89.9 | 55.28 |
| BAC19852 | Rice | plasma membrane | 95.96 | 29.23 |
| ATCG01100.1 | Thale cress | plasma membrane | 41.41 | 11.39 |
Protein Annotations
| EntrezGene:2745467 | MapMan:35.1 | ProteinID:AEC06083.1 | ArrayExpress:AT2G07785 | EnsemblPlantsGene:AT2G07785 | RefSeq:AT2G07785 |
| TAIR:AT2G07785 | RefSeq:AT2G07785-TAIR-G | EnsemblPlants:AT2G07785.1 | TAIR:AT2G07785.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 |
| GO:GO:0005886 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0045333 | GO:GO:0055114 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | RefSeq:NP_973440.1 |
| PFAM:PF00146 | PO:PO:0009025 | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | UniProt:Q3EC42 | TMHMM:TMhelix |
| UniParc:UPI000034EEC2 | : | : | : | : | : |
Description
NADH dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q3EC42]
Coordinates
chr2:+:3348003..3348904
Molecular Weight (calculated)
10611.2 Da
IEP (calculated)
10.104
GRAVY (calculated)
0.682
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGRSSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.