Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G214900.1 | Wheat | mitochondrion | 95.0 | 94.41 |
| TraesCSU01G180100.1 | Wheat | golgi, mitochondrion, vacuole | 84.38 | 93.75 |
| TraesCS7B01G486900.1 | Wheat | golgi, mitochondrion, vacuole | 84.38 | 93.75 |
| TraesCS3B01G013800.1 | Wheat | golgi, mitochondrion, vacuole | 84.38 | 93.75 |
| TraesCS4B01G117500.1 | Wheat | golgi, mitochondrion, vacuole | 93.75 | 93.17 |
| TraesCS6B01G338500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 83.75 | 93.06 |
| Zm00001d046083_P001 | Maize | mitochondrion | 93.12 | 92.55 |
| TraesCS5B01G339500.1 | Wheat | mitochondrion | 83.12 | 92.36 |
| AT2G07785.1 | Thale cress | golgi, mitochondrion, plastid, vacuole | 56.88 | 91.92 |
| VIT_00s0396g00020.t01 | Wine grape | plastid | 56.25 | 90.91 |
| TraesCS5B01G030900.1 | Wheat | mitochondrion | 90.0 | 89.44 |
| GSMUA_AchrUn_... | Banana | golgi | 63.75 | 82.93 |
| Solyc05g023920.1.1 | Tomato | plastid | 47.5 | 76.77 |
| ATMG01275.1 | Thale cress | endoplasmic reticulum | 56.88 | 70.54 |
| CDY45488 | Canola | golgi, mitochondrion, nucleus, plastid | 64.38 | 64.78 |
| CDY36712 | Canola | golgi, mitochondrion, nucleus, plastid | 64.38 | 64.78 |
| BAC19852 | Rice | plasma membrane | 66.25 | 32.62 |
| TraesCS1B01G405800.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 26.25 | 22.46 |
| TraesCS7B01G080400.1 | Wheat | vacuole | 25.62 | 21.93 |
| TraesCS3B01G582300.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS3B01G582200.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS3B01G459500.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS5B01G250500.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS3B01G189200.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS1B01G405700.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS1B01G087800.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G064500.1 | EnsemblPlantsGene:TraesCS2B01G064500 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0055114 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | PFAM:PF00146 | TMHMM:TMhelix |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:30669128..30669612
Molecular Weight (calculated)
17428.4 Da
IEP (calculated)
10.505
GRAVY (calculated)
0.361
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVQRRKGP DVVGSFGLLQ PLADGLKLIK EPISPSSANF SLFRMAPVAT FMLSLVAWAV VPFDYGMVLS YPNIGLLYLF AISSLGVYGI IIAGCSRKTG
101: GGRSVAYDIR TNWSKWVCAA GVERSTLHRC GLTGLGLINP FFQSSRGRSL FWAGIEKWKS
101: GGRSVAYDIR TNWSKWVCAA GVERSTLHRC GLTGLGLINP FFQSSRGRSL FWAGIEKWKS
1: MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGRSSN
Arabidopsis Description
NADH dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q3EC42]
SUBAcon: [mitochondrion,golgi,plastid,vacuole]
SUBAcon: [mitochondrion,golgi,plastid,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.