Factsheet for TraesCS3B01G189200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G087800.1	Wheat	extracellular, golgi	98.57	98.57
TraesCS3B01G582300.1	Wheat	extracellular, golgi	98.57	98.57
TraesCS2D01G243600.1	Wheat	extracellular, golgi	98.57	98.57
TraesCS3B01G582200.1	Wheat	extracellular, golgi	98.57	98.57
TraesCS3B01G459500.1	Wheat	extracellular, golgi	98.57	98.57
TraesCS1B01G405700.1	Wheat	extracellular, golgi	97.14	97.14
TraesCS5B01G250500.1	Wheat	extracellular, golgi	97.14	97.14
TraesCS7A01G290700.1	Wheat	endoplasmic reticulum, extracellular	91.43	92.75
GSMUA_AchrUn_...	Banana	golgi, mitochondrion, plastid, vacuole	45.71	66.67
VIT_08s0056g01050.t01	Wine grape	extracellular, golgi	44.29	50.82
AGP50810	Barley	plasma membrane	57.14	24.54
Solyc11g021230.1.1	Tomato	plastid	54.29	20.32
CDY03034	Canola	plasma membrane	52.86	17.21
Solyc02g011790.1.1	Tomato	extracellular, plasma membrane, vacuole	8.57	4.65
Solyc11g050760.1.1	Tomato	peroxisome, plastid, vacuole	1.43	0.88
TraesCS3B01G013800.1	Wheat	golgi, mitochondrion, vacuole	0.0	0.0
TraesCS2B01G064500.1	Wheat	golgi, mitochondrion, vacuole	0.0	0.0
TraesCS4B01G117500.1	Wheat	golgi, mitochondrion, vacuole	0.0	0.0
TraesCS5B01G030900.1	Wheat	mitochondrion	0.0	0.0
TraesCS1B01G405800.1	Wheat	endoplasmic reticulum, golgi, vacuole	0.0	0.0
TraesCS5B01G339500.1	Wheat	mitochondrion	0.0	0.0
TraesCS6B01G338500.1	Wheat	endoplasmic reticulum, golgi, vacuole	0.0	0.0
TraesCS7B01G080400.1	Wheat	vacuole	0.0	0.0
TraesCS7B01G486900.1	Wheat	golgi, mitochondrion, vacuole	0.0	0.0
VIT_08s0056g01060.t01	Wine grape	vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS3B01G189200.1	EnsemblPlantsGene:TraesCS3B01G189200	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0055114	InterPro:NADH_UbQ_OxRdtase_su1/FPO	PANTHER:PTHR11432	PANTHER:PTHR11432:SF13	PFAM:PF00146	SEG:seg
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:201560677..201560889

Molecular Weight (calculated)

7985.3 Da

IEP (calculated)

11.090

GRAVY (calculated)

0.873

Length

70 amino acids

Sequence
(BLAST)

1: MNKAVGILEM TMGIFITLTK AYLFLFISIT IRWTLPRMRI DQLLNLGWKF LLPISLGNLL LTTSSQLVSL

Best Arabidopsis Sequence Match ( ATCG01100.1 )
(BLAST)

001: MIIYATAVQT INSFVKLESL KEVYGLIWIF VPIFSLVLGI ITGVLVIVWL EREISAGIQQ RIGPEYAGPL GILQALADGT KLLFKENLRP SRGNTPLFSI
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL

Arabidopsis Description

NDHANAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q37165]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.