Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G180100.1 | Wheat | golgi, mitochondrion, vacuole | 81.99 | 91.67 |
| TraesCS1A01G098600.1 | Wheat | mitochondrion | 81.99 | 91.67 |
| TraesCS7B01G486900.1 | Wheat | golgi, mitochondrion, vacuole | 81.99 | 91.67 |
| TraesCS5B01G339500.1 | Wheat | mitochondrion | 81.99 | 91.67 |
| TraesCS3B01G013800.1 | Wheat | golgi, mitochondrion, vacuole | 81.99 | 91.67 |
| TraesCS6B01G338500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 81.37 | 90.97 |
| TraesCS2B01G064500.1 | Wheat | golgi, mitochondrion, vacuole | 89.44 | 90.0 |
| AT2G07785.1 | Thale cress | golgi, mitochondrion, plastid, vacuole | 55.28 | 89.9 |
| Zm00001d046083_P001 | Maize | mitochondrion | 89.44 | 89.44 |
| VIT_00s0396g00020.t01 | Wine grape | plastid | 54.66 | 88.89 |
| TraesCS4B01G117500.1 | Wheat | golgi, mitochondrion, vacuole | 88.82 | 88.82 |
| GSMUA_AchrUn_... | Banana | golgi | 62.73 | 82.11 |
| Solyc05g023920.1.1 | Tomato | plastid | 47.83 | 77.78 |
| ATMG01275.1 | Thale cress | endoplasmic reticulum | 55.28 | 68.99 |
| CDY45488 | Canola | golgi, mitochondrion, nucleus, plastid | 63.35 | 64.15 |
| CDY36712 | Canola | golgi, mitochondrion, nucleus, plastid | 63.35 | 64.15 |
| BAC19852 | Rice | plasma membrane | 65.22 | 32.31 |
| TraesCS1B01G405800.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 24.84 | 21.39 |
| TraesCS7B01G080400.1 | Wheat | vacuole | 24.22 | 20.86 |
| TraesCS3B01G459500.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS3B01G582200.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS3B01G582300.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS3B01G189200.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS5B01G250500.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS1B01G405700.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
| TraesCS1B01G087800.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G030900.1 | EnsemblPlantsGene:TraesCS5B01G030900 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0055114 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | InterPro:NADH_UbQ_OxRdtase_su1_CS | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | PFAM:PF00146 |
| ScanProsite:PS00667 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:34067068..34067554
Molecular Weight (calculated)
17588.7 Da
IEP (calculated)
10.725
GRAVY (calculated)
0.366
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFVQRRKGP HVVGSFGLLQ PLADGLKLIL KEPISPSSAN LSLFRMAPVA TFMLSLVAWA IVPFDYGMVL SDPNIRLLYL FAISSLGVYG IIIAGWSSKT
101: GGGRSVAYDI RTNWSKWVCA TGVEQSTLHR CGLIGLGLIN PFFHSSRGQS LFQVGIKKWK S
101: GGGRSVAYDI RTNWSKWVCA TGVEQSTLHR CGLIGLGLIN PFFHSSRGQS LFQVGIKKWK S
1: MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGRSSN
Arabidopsis Description
NADH dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q3EC42]
SUBAcon: [mitochondrion,golgi,plastid,vacuole]
SUBAcon: [mitochondrion,golgi,plastid,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.