Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45488 | Canola | golgi, mitochondrion, nucleus, plastid | 100.0 | 100.0 |
| AT2G07785.1 | Thale cress | golgi, mitochondrion, plastid, vacuole | 61.64 | 98.99 |
| VIT_00s0396g00020.t01 | Wine grape | plastid | 59.75 | 95.96 |
| HORVU4Hr1G052660.1 | Barley | golgi, mitochondrion, vacuole | 59.12 | 92.16 |
| HORVU2Hr1G004300.1 | Barley | golgi, mitochondrion, plastid, vacuole | 56.6 | 88.24 |
| HORVU3Hr1G044940.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 30.19 | 84.21 |
| TraesCS4A01G360300.1 | Wheat | golgi, mitochondrion, vacuole | 55.35 | 82.24 |
| HORVU6Hr1G039110.1 | Barley | extracellular, golgi, vacuole | 17.61 | 80.0 |
| Solyc05g023920.1.1 | Tomato | plastid | 48.43 | 77.78 |
| HORVU0Hr1G019930.1 | Barley | golgi, mitochondrion, vacuole | 59.12 | 76.42 |
| ATMG01275.1 | Thale cress | endoplasmic reticulum | 61.64 | 75.97 |
| GSMUA_AchrUn_... | Banana | golgi | 57.86 | 74.8 |
| TraesCSU01G180100.1 | Wheat | golgi, mitochondrion, vacuole | 67.3 | 74.31 |
| TraesCSU01G173300.1 | Wheat | golgi, mitochondrion, vacuole | 67.3 | 74.31 |
| TraesCS7B01G486900.1 | Wheat | golgi, mitochondrion, vacuole | 67.3 | 74.31 |
| TraesCS3D01G173600.1 | Wheat | golgi, mitochondrion, vacuole | 67.3 | 74.31 |
| TraesCS3B01G013800.1 | Wheat | golgi, mitochondrion, vacuole | 67.3 | 74.31 |
| TraesCS7A01G388200.1 | Wheat | golgi | 66.67 | 73.61 |
| TraesCS6B01G338500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 66.04 | 72.92 |
| TraesCS1A01G098600.1 | Wheat | mitochondrion | 66.04 | 72.92 |
| TraesCS5B01G339500.1 | Wheat | mitochondrion | 66.04 | 72.92 |
| TraesCS6A01G397300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 65.41 | 72.22 |
| TraesCS4A01G069900.1 | Wheat | golgi, mitochondrion, vacuole | 67.3 | 66.46 |
| TraesCS3A01G456900.1 | Wheat | golgi, mitochondrion, vacuole | 66.67 | 65.84 |
| TraesCS2D01G247600.1 | Wheat | golgi, mitochondrion, vacuole | 66.04 | 65.22 |
| TraesCS6A01G114500.1 | Wheat | mitochondrion | 66.04 | 65.22 |
| TraesCS7A01G080700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 65.41 | 64.6 |
| TraesCS5D01G214900.1 | Wheat | mitochondrion | 65.41 | 64.6 |
| TraesCS2B01G064500.1 | Wheat | golgi, mitochondrion, vacuole | 64.78 | 64.38 |
| TraesCS1D01G258700.1 | Wheat | mitochondrion | 64.78 | 63.98 |
| TraesCS4D01G138500.1 | Wheat | mitochondrion | 64.78 | 63.98 |
| TraesCS4B01G117500.1 | Wheat | golgi, mitochondrion, vacuole | 64.78 | 63.98 |
| TraesCS4A01G360600.1 | Wheat | mitochondrion | 64.15 | 63.75 |
| TraesCS4A01G360500.1 | Wheat | golgi, mitochondrion, vacuole | 64.15 | 63.75 |
| TraesCS5B01G030900.1 | Wheat | mitochondrion | 64.15 | 63.35 |
| Zm00001d046083_P001 | Maize | mitochondrion | 63.52 | 62.73 |
| BAC19852 | Rice | plasma membrane | 62.26 | 30.46 |
| CDY19661 | Canola | plasma membrane | 28.3 | 14.24 |
| CDY21196 | Canola | plasma membrane | 28.3 | 14.24 |
| CDY14838 | Canola | plasma membrane | 28.3 | 14.24 |
| CDX95227 | Canola | plasma membrane | 28.3 | 14.24 |
| CDY03034 | Canola | plasma membrane | 6.92 | 5.12 |
Protein Annotations
| MapMan:35.1 | GO:A0A078HFX4 | UniProt:A0A078HFX4 | EnsemblPlants:CDY36712 | ProteinID:CDY36712 | ProteinID:CDY36712.1 |
| ProteinID:CDY45488.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00062510001 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | PFAM:PF00146 | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | TMHMM:TMhelix |
| UniParc:UPI0004EE71AC | : | : | : | : | : |
Description
BnaC02g31330DBnaC02g31330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFX4]
Coordinates
chrLK032382:+:218938..219489
Molecular Weight (calculated)
17223.2 Da
IEP (calculated)
10.528
GRAVY (calculated)
0.383
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGRSSVE
101: RSTLHRCGLT GLGLRNPFFH SSRGLDAPFE PVFINLVAHF SGPGSISRSH KKICFSSHH
101: RSTLHRCGLT GLGLRNPFFH SSRGLDAPFE PVFINLVAHF SGPGSISRSH KKICFSSHH
001: TYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
Arabidopsis Description
NAD1ANADH dehydrogenase 1A [Source:TAIR;Acc:ATMG01275]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.