Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G052660.1 | Barley | golgi, mitochondrion, vacuole | 82.93 | 100.0 |
| HORVU2Hr1G004300.1 | Barley | golgi, mitochondrion, plastid, vacuole | 79.67 | 96.08 |
| AT2G07785.1 | Thale cress | golgi, mitochondrion, plastid, vacuole | 76.42 | 94.95 |
| HORVU6Hr1G039110.1 | Barley | extracellular, golgi, vacuole | 26.83 | 94.29 |
| VIT_00s0396g00020.t01 | Wine grape | plastid | 75.61 | 93.94 |
| GSMUA_AchrUn_... | Banana | golgi | 90.24 | 90.24 |
| HORVU3Hr1G044940.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 39.02 | 84.21 |
| Solyc05g023920.1.1 | Tomato | plastid | 64.23 | 79.8 |
| ATMG01275.1 | Thale cress | endoplasmic reticulum | 76.42 | 72.87 |
| TraesCS3A01G456900.1 | Wheat | golgi, mitochondrion, vacuole | 92.68 | 70.81 |
| Zm00001d046083_P001 | Maize | mitochondrion | 89.43 | 68.32 |
| CDY45488 | Canola | golgi, mitochondrion, nucleus, plastid | 76.42 | 59.12 |
| CDY36712 | Canola | golgi, mitochondrion, nucleus, plastid | 76.42 | 59.12 |
| BAC19852 | Rice | plasma membrane | 81.3 | 30.77 |
| HORVU4Hr1G027700.1 | Barley | vacuole | 24.39 | 21.74 |
| HORVU1Hr1G048090.1 | Barley | vacuole | 36.59 | 12.43 |
| HORVU5Hr1G064770.1 | Barley | vacuole | 35.77 | 12.15 |
| HORVU7Hr1G107860.1 | Barley | plasma membrane | 26.02 | 11.19 |
| HORVU3Hr1G075010.1 | Barley | cytosol, golgi, plasma membrane | 4.88 | 8.11 |
| HORVU5Hr1G005420.1 | Barley | cytosol | 2.44 | 4.23 |
| HORVU6Hr1G087850.1 | Barley | extracellular, plasma membrane | 0.0 | 0.0 |
| AGP50810 | Barley | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G019930.1 | EnsemblPlantsGene:HORVU0Hr1G019930 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | InterPro:NADH_UbQ_OxRdtase_su1_CS | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | PFAM:PF00146 |
| ScanProsite:PS00667 | TMHMM:TMhelix | UniParc:UPI000B48876D | UniProt:A0A287E5R8 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchrUn:+:104750581..104753747
Molecular Weight (calculated)
13321.5 Da
IEP (calculated)
10.152
GRAVY (calculated)
0.494
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FSLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGWSSKT
101: GGGRSVAYDI RTNWSKMGLC RRC
101: GGGRSVAYDI RTNWSKMGLC RRC
001: TYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
Arabidopsis Description
NAD1ANADH dehydrogenase 1A [Source:TAIR;Acc:ATMG01275]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.