Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G048090.1 | Barley | vacuole | 98.25 | 77.62 |
| HORVU5Hr1G064770.1 | Barley | vacuole | 97.55 | 77.07 |
| CAA33910 | Rice | vacuole | 95.45 | 75.41 |
| GRMZM5G874448_P01 | Maize | plastid | 94.76 | 74.86 |
| HORVU6Hr1G087850.1 | Barley | extracellular, plasma membrane | 17.13 | 74.24 |
| CDX95227 | Canola | plasma membrane | 77.27 | 69.94 |
| CDY14838 | Canola | plasma membrane | 77.27 | 69.94 |
| CDY19661 | Canola | plasma membrane | 77.27 | 69.94 |
| CDY21196 | Canola | plasma membrane | 77.27 | 69.94 |
| ATCG01100.1 | Thale cress | plasma membrane | 77.62 | 61.67 |
| TraesCSU01G261700.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 35.66 | 54.55 |
| TraesCS7B01G080400.1 | Wheat | vacuole | 33.57 | 51.34 |
| TraesCS2D01G228400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 27.27 | 48.45 |
| KRG99585 | Soybean | endoplasmic reticulum, plasma membrane | 23.08 | 38.6 |
| HORVU4Hr1G027700.1 | Barley | vacuole | 17.48 | 36.23 |
| AGP50810 | Barley | plasma membrane | 19.58 | 34.36 |
| Solyc02g011800.1.1 | Tomato | plasma membrane | 16.43 | 34.31 |
| HORVU6Hr1G039110.1 | Barley | extracellular, golgi, vacuole | 4.2 | 34.29 |
| PGSC0003DMT400022653 | Potato | vacuole | 13.99 | 29.2 |
| KRG99456 | Soybean | peroxisome, plasma membrane | 19.23 | 28.65 |
| HORVU4Hr1G052660.1 | Barley | golgi, mitochondrion, vacuole | 10.14 | 28.43 |
| HORVU3Hr1G044940.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 5.59 | 28.07 |
| HORVU2Hr1G004300.1 | Barley | golgi, mitochondrion, plastid, vacuole | 9.79 | 27.45 |
| HORVU0Hr1G019930.1 | Barley | golgi, mitochondrion, vacuole | 11.19 | 26.02 |
| HORVU5Hr1G005420.1 | Barley | cytosol | 0.7 | 2.82 |
| HORVU3Hr1G075010.1 | Barley | cytosol, golgi, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| MapMan:1.1.8.1.1.1 | UniProt:A0A287XQU5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009536 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:HORVU7Hr1G107860 | EnsemblPlants:HORVU7Hr1G107860.1 |
| InterPro:NADH_UbQ_OxRdtase_su1/FPO | InterPro:NADH_UbQ_OxRdtase_su1_CS | PFAM:PF00146 | ScanProsite:PS00668 | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF13 |
| TMHMM:TMhelix | UniParc:UPI000B469B97 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:624097352..624099473
Molecular Weight (calculated)
31948.4 Da
IEP (calculated)
4.737
GRAVY (calculated)
0.753
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLNYFFKED ILPSRGDISL FSIGPSIAVI SVLLSFLVIP LGYHFVLADL SIGVFLWIAI SSIAPIGLLM AGYSSNNKYS FSGGLRAAAQ SISYEIPLTF
101: CVLAISLLSN SSSTVDIVEA QSKYGFFGWN IWRQPIGFLV FLISSLAECE RLPFDLPEAE EELVAGYQTE YSGIKYGLFY LVSYLNLLVS SLFVTVLYLG
201: GWNFSIPYIS FFDFFQMNKA VGILEMTMGI FITLTKAYLF LFISITIRWT LPRMRMDQLL NLGWKFLLPI SLGNLLLTTS SQLVSL
101: CVLAISLLSN SSSTVDIVEA QSKYGFFGWN IWRQPIGFLV FLISSLAECE RLPFDLPEAE EELVAGYQTE YSGIKYGLFY LVSYLNLLVS SLFVTVLYLG
201: GWNFSIPYIS FFDFFQMNKA VGILEMTMGI FITLTKAYLF LFISITIRWT LPRMRMDQLL NLGWKFLLPI SLGNLLLTTS SQLVSL
001: MIIYATAVQT INSFVKLESL KEVYGLIWIF VPIFSLVLGI ITGVLVIVWL EREISAGIQQ RIGPEYAGPL GILQALADGT KLLFKENLRP SRGNTPLFSI
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL
Arabidopsis Description
NDHANAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q37165]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.