Factsheet for HORVU4Hr1G027700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

golgi 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	golgi, vacuole
MultiLoc:	golgi
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G075010.1	Barley	cytosol, golgi, plasma membrane	45.65	85.14
TraesCS2D01G228400.1	Wheat	endoplasmic reticulum, golgi, vacuole	86.96	74.53
HORVU5Hr1G005420.1	Barley	cytosol	35.51	69.01
PGSC0003DMT400022653	Potato	vacuole	68.12	68.61
TraesCSU01G261700.1	Wheat	endoplasmic reticulum, golgi, vacuole	86.96	64.17
TraesCS7B01G080400.1	Wheat	vacuole	83.33	61.5
Solyc02g011800.1.1	Tomato	plasma membrane	51.45	51.82
KRG99585	Soybean	endoplasmic reticulum, plasma membrane	44.2	35.67
KRG99456	Soybean	peroxisome, plasma membrane	47.83	34.38
HORVU1Hr1G048090.1	Barley	vacuole	89.86	34.25
HORVU5Hr1G064770.1	Barley	vacuole	88.41	33.7
CAA33910	Rice	vacuole	84.78	32.32
GRMZM5G874448_P01	Maize	plastid	83.33	31.77
HORVU4Hr1G052660.1	Barley	golgi, mitochondrion, vacuole	21.74	29.41
HORVU2Hr1G004300.1	Barley	golgi, mitochondrion, plastid, vacuole	21.01	28.43
ATCG01100.1	Thale cress	plasma membrane	65.22	25.0
HORVU0Hr1G019930.1	Barley	golgi, mitochondrion, vacuole	21.74	24.39
CDY21196	Canola	plasma membrane	42.75	18.67
CDY19661	Canola	plasma membrane	42.75	18.67
CDY14838	Canola	plasma membrane	42.75	18.67
CDX95227	Canola	plasma membrane	42.75	18.67
HORVU7Hr1G107860.1	Barley	plasma membrane	36.23	17.48
HORVU6Hr1G039110.1	Barley	extracellular, golgi, vacuole	4.35	17.14
HORVU3Hr1G044940.1	Barley	endoplasmic reticulum, extracellular, vacuole	6.52	15.79
AGP50810	Barley	plasma membrane	0.0	0.0
HORVU6Hr1G087850.1	Barley	extracellular, plasma membrane	0.0	0.0

Protein Annotations

MapMan:35.1	UniProt:A0A287NNM0	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:HORVU4Hr1G027700	EnsemblPlants:HORVU4Hr1G027700.1	InterPro:NADH_UbQ_OxRdtase_su1/FPO	InterPro:NADH_UbQ_OxRdtase_su1_CS	PFAM:PF00146
ScanProsite:PS00667	PANTHER:PTHR11432	PANTHER:PTHR11432:SF13	TMHMM:TMhelix	UniParc:UPI000B483FC6	SEG:seg

Description

No Description!

Coordinates

chrchr4H:-:169848027..169848874

Molecular Weight (calculated)

15223.0 Da

IEP (calculated)

4.234

GRAVY (calculated)

0.845

Length

138 amino acids

Sequence
(BLAST)

001: MIIDRVEVET INSFSQSELL KEVYGLISIL PILTLLLGIT IEVLIIVWLE REISASIEQR IGPQYAAPPG MLQAIADGTK LLFKEDILPL RGDISLFSIG
101: PSIAVISVLL SFLVIHLGYH FVLADLSIGV FYGLPFQE

Best Arabidopsis Sequence Match ( ATCG01100.1 )
(BLAST)

001: MIIYATAVQT INSFVKLESL KEVYGLIWIF VPIFSLVLGI ITGVLVIVWL EREISAGIQQ RIGPEYAGPL GILQALADGT KLLFKENLRP SRGNTPLFSI
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL

Arabidopsis Description

NDHANAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q37165]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.