Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G075010.1 | Barley | cytosol, golgi, plasma membrane | 71.83 | 68.92 |
| HORVU4Hr1G027700.1 | Barley | vacuole | 69.01 | 35.51 |
| VIT_08s0056g01060.t01 | Wine grape | vacuole | 21.13 | 14.56 |
| HORVU1Hr1G048090.1 | Barley | vacuole | 71.83 | 14.09 |
| HORVU5Hr1G064770.1 | Barley | vacuole | 70.42 | 13.81 |
| Solyc02g011790.1.1 | Tomato | extracellular, plasma membrane, vacuole | 7.04 | 3.88 |
| HORVU4Hr1G052660.1 | Barley | golgi, mitochondrion, vacuole | 4.23 | 2.94 |
| HORVU0Hr1G019930.1 | Barley | golgi, mitochondrion, vacuole | 4.23 | 2.44 |
| HORVU2Hr1G004300.1 | Barley | golgi, mitochondrion, plastid, vacuole | 2.82 | 1.96 |
| VIT_08s0056g01050.t01 | Wine grape | extracellular, golgi | 1.41 | 1.64 |
| Solyc11g050760.1.1 | Tomato | peroxisome, plastid, vacuole | 1.41 | 0.88 |
| HORVU7Hr1G107860.1 | Barley | plasma membrane | 2.82 | 0.7 |
| Solyc11g021230.1.1 | Tomato | plastid | 1.41 | 0.53 |
| CDY03034 | Canola | plasma membrane | 1.41 | 0.47 |
| HORVU3Hr1G044940.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 0.0 | 0.0 |
| AGP50810 | Barley | plasma membrane | 0.0 | 0.0 |
| HORVU6Hr1G039110.1 | Barley | extracellular, golgi, vacuole | 0.0 | 0.0 |
| HORVU6Hr1G087850.1 | Barley | extracellular, plasma membrane | 0.0 | 0.0 |
| TraesCS1A01G130500.1 | Wheat | extracellular, golgi | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G005420.1 | EnsemblPlantsGene:HORVU5Hr1G005420 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000B476934 | UniProt:A0A287Q827 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr5H:+:8907004..8913753
Molecular Weight (calculated)
7761.9 Da
IEP (calculated)
4.245
GRAVY (calculated)
1.058
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MIIDRVEVET INSFSKSELL KEVYGLISII PILTLLLGIT IEVLVIVWLE XXXYNNVLVL NMLAPWACFK L
001: MIIYATAVQT INSFVKLESL KEVYGLIWIF VPIFSLVLGI ITGVLVIVWL EREISAGIQQ RIGPEYAGPL GILQALADGT KLLFKENLRP SRGNTPLFSI
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL
Arabidopsis Description
NDHANAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q37165]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.