Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G004300.1 | Barley | golgi, mitochondrion, plastid, vacuole | 96.08 | 96.08 |
| AT2G07785.1 | Thale cress | golgi, mitochondrion, plastid, vacuole | 92.16 | 94.95 |
| HORVU6Hr1G039110.1 | Barley | extracellular, golgi, vacuole | 32.35 | 94.29 |
| VIT_00s0396g00020.t01 | Wine grape | plastid | 91.18 | 93.94 |
| HORVU3Hr1G044940.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 47.06 | 84.21 |
| HORVU0Hr1G019930.1 | Barley | golgi, mitochondrion, vacuole | 100.0 | 82.93 |
| Solyc05g023920.1.1 | Tomato | plastid | 77.45 | 79.8 |
| GSMUA_AchrUn_... | Banana | golgi | 92.16 | 76.42 |
| ATMG01275.1 | Thale cress | endoplasmic reticulum | 92.16 | 72.87 |
| TraesCSU01G173300.1 | Wheat | golgi, mitochondrion, vacuole | 100.0 | 70.83 |
| TraesCS7B01G486900.1 | Wheat | golgi, mitochondrion, vacuole | 100.0 | 70.83 |
| TraesCS3D01G173600.1 | Wheat | golgi, mitochondrion, vacuole | 100.0 | 70.83 |
| TraesCS7A01G388200.1 | Wheat | golgi | 98.04 | 69.44 |
| TraesCS4A01G069900.1 | Wheat | golgi, mitochondrion, vacuole | 99.02 | 62.73 |
| Zm00001d046083_P001 | Maize | mitochondrion | 94.12 | 59.63 |
| CDY45488 | Canola | golgi, mitochondrion, nucleus, plastid | 92.16 | 59.12 |
| CDY36712 | Canola | golgi, mitochondrion, nucleus, plastid | 92.16 | 59.12 |
| BAC19852 | Rice | plasma membrane | 96.08 | 30.15 |
| HORVU4Hr1G027700.1 | Barley | vacuole | 29.41 | 21.74 |
| HORVU1Hr1G048090.1 | Barley | vacuole | 41.18 | 11.6 |
| HORVU5Hr1G064770.1 | Barley | vacuole | 40.2 | 11.33 |
| HORVU7Hr1G107860.1 | Barley | plasma membrane | 28.43 | 10.14 |
| HORVU3Hr1G075010.1 | Barley | cytosol, golgi, plasma membrane | 5.88 | 8.11 |
| HORVU5Hr1G005420.1 | Barley | cytosol | 2.94 | 4.23 |
| HORVU6Hr1G087850.1 | Barley | extracellular, plasma membrane | 0.0 | 0.0 |
| AGP50810 | Barley | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G052660.1 | EnsemblPlantsGene:HORVU4Hr1G052660 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | InterPro:NADH_UbQ_OxRdtase_su1_CS | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | PFAM:PF00146 |
| ScanProsite:PS00667 | TMHMM:TMhelix | UniParc:UPI0002948348 | UniProt:M0VEK4 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr4H:-:437462985..437463290
Molecular Weight (calculated)
10866.5 Da
IEP (calculated)
9.663
GRAVY (calculated)
0.724
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FSLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGWSSKT
101: GG
101: GG
001: TYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
Arabidopsis Description
NAD1ANADH dehydrogenase 1A [Source:TAIR;Acc:ATMG01275]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.