Factsheet for TraesCS7A01G388200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	mitochondrion

plastid: 22160430
golgi: 25769308
unclear: 25769308

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G052660.1	Barley	golgi, mitochondrion, vacuole	69.44	98.04
TraesCSU01G173300.1	Wheat	golgi, mitochondrion, vacuole	97.22	97.22
TraesCS7B01G486900.1	Wheat	golgi, mitochondrion, vacuole	97.22	97.22
TraesCS3D01G173600.1	Wheat	golgi, mitochondrion, vacuole	97.22	97.22
TraesCS6A01G397300.1	Wheat	endoplasmic reticulum, golgi, vacuole	95.83	95.83
TraesCS1A01G098600.1	Wheat	mitochondrion	95.83	95.83
AT2G07785.1	Thale cress	golgi, mitochondrion, plastid, vacuole	65.28	94.95
VIT_00s0396g00020.t01	Wine grape	plastid	63.19	91.92
TraesCS4A01G360300.1	Wheat	golgi, mitochondrion, vacuole	65.97	88.78
TraesCS6A01G114500.1	Wheat	mitochondrion	95.14	85.09
TraesCS3A01G456900.1	Wheat	golgi, mitochondrion, vacuole	95.14	85.09
GSMUA_AchrUn_...	Banana	golgi	72.22	84.55
TraesCS7A01G080700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	93.75	83.85
TraesCS4A01G360600.1	Wheat	mitochondrion	90.28	81.25
TraesCS4A01G360500.1	Wheat	golgi, mitochondrion, vacuole	90.28	81.25
TraesCS4A01G069900.1	Wheat	golgi, mitochondrion, vacuole	87.5	78.26
Solyc05g023920.1.1	Tomato	plastid	53.47	77.78
ATMG01275.1	Thale cress	endoplasmic reticulum	65.28	72.87
CDY45488	Canola	golgi, mitochondrion, nucleus, plastid	73.61	66.67
CDY36712	Canola	golgi, mitochondrion, nucleus, plastid	73.61	66.67
BAC19852	Rice	plasma membrane	72.22	32.0
TraesCS3A01G430400.1	Wheat	endoplasmic reticulum, golgi, vacuole	28.47	21.93
TraesCS4A01G155400.1	Wheat	extracellular, golgi	0.0	0.0
TraesCS5A01G056300.1	Wheat	extracellular, plasma membrane	0.0	0.0
TraesCS3A01G430300.1	Wheat	extracellular, golgi	0.0	0.0
TraesCS7A01G290700.1	Wheat	endoplasmic reticulum, extracellular	0.0	0.0
TraesCS1A01G130500.1	Wheat	extracellular, golgi	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7A01G388200.1	EnsemblPlantsGene:TraesCS7A01G388200	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0055114	InterPro:NADH_UbQ_OxRdtase_su1/FPO	InterPro:NADH_UbQ_OxRdtase_su1_CS	PANTHER:PTHR11432	PANTHER:PTHR11432:SF3	PFAM:PF00146
ScanProsite:PS00667	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7A:+:563584184..563584670

Molecular Weight (calculated)

15866.5 Da

IEP (calculated)

10.453

GRAVY (calculated)

0.351

Length

144 amino acids

Sequence
(BLAST)

001: MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDPNIELLYL FAISSLGVYG IIIAGWSSKT
101: GGGRSVAYDI RTNWSKMGLG LINPFFHSSR DRSLFRAGIE KWKS

Best Arabidopsis Sequence Match ( ATMG01275.1 )
(BLAST)

001: TYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN

Arabidopsis Description

NAD1ANADH dehydrogenase 1A [Source:TAIR;Acc:ATMG01275]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.