Factsheet for TraesCS3A01G430400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 2
vacuole 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G360300.1	Wheat	golgi, mitochondrion, vacuole	20.32	35.51
TraesCS1A01G098600.1	Wheat	mitochondrion	22.46	29.17
TraesCS6A01G397300.1	Wheat	endoplasmic reticulum, golgi, vacuole	22.46	29.17
TraesCS7A01G388200.1	Wheat	golgi	21.93	28.47
TraesCS3A01G456900.1	Wheat	golgi, mitochondrion, vacuole	22.46	26.09
TraesCS7A01G080700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	22.46	26.09
TraesCS6A01G114500.1	Wheat	mitochondrion	22.46	26.09
TraesCS4A01G360500.1	Wheat	golgi, mitochondrion, vacuole	21.93	25.62
TraesCS4A01G069900.1	Wheat	golgi, mitochondrion, vacuole	21.93	25.47
TraesCS4A01G360600.1	Wheat	mitochondrion	21.39	25.0
TraesCSU01G204300.1	Wheat	extracellular, golgi	0.0	0.0
TraesCS7A01G290700.1	Wheat	endoplasmic reticulum, extracellular	0.0	0.0
TraesCS5A01G056300.1	Wheat	extracellular, plasma membrane	0.0	0.0
TraesCS4A01G155400.1	Wheat	extracellular, golgi	0.0	0.0
TraesCS3B01G582200.1	Wheat	extracellular, golgi	0.0	0.0
TraesCS3B01G459500.1	Wheat	extracellular, golgi	0.0	0.0
TraesCS3A01G430300.1	Wheat	extracellular, golgi	0.0	0.0
TraesCS1A01G130500.1	Wheat	extracellular, golgi	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS3A01G430400.1	EnsemblPlantsGene:TraesCS3A01G430400	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0055114	InterPro:NADH_UbQ_OxRdtase_su1/FPO	InterPro:NADH_UbQ_OxRdtase_su1_CS	PANTHER:PTHR11432	PANTHER:PTHR11432:SF13	PFAM:PF00146
ScanProsite:PS00667	SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3A:-:672879885..672880448

Molecular Weight (calculated)

20279.4 Da

IEP (calculated)

4.493

GRAVY (calculated)

0.970

Length

187 amino acids

Sequence
(BLAST)

001: MIIDRVEVET INSFSKLELL KEVYGLISIL PILTLLLGIT IEVLIIVWLE REISTSIQQR IGPEYAGPLG LLQAIVDGTK LLFKEDILPS RGDISLFSIG
101: PSIAVISILL SFLVIPLGYH FVLADLSIGV FLWIAISSIA PIGLLMAGYS SNNKYSFSGG LRAAAQSISY EIPLTFCVLA ISLCVIP

Best Arabidopsis Sequence Match ( ATCG01100.1 )
(BLAST)

001: MIIYATAVQT INSFVKLESL KEVYGLIWIF VPIFSLVLGI ITGVLVIVWL EREISAGIQQ RIGPEYAGPL GILQALADGT KLLFKENLRP SRGNTPLFSI
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL

Arabidopsis Description

NDHANAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q37165]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.