Factsheet for TraesCS7A01G290700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G243600.1	Wheat	extracellular, golgi	94.2	92.86
TraesCS3A01G430300.1	Wheat	extracellular, golgi	94.2	92.86
TraesCS5A01G056300.1	Wheat	extracellular, plasma membrane	92.75	91.43
TraesCS4A01G155400.1	Wheat	extracellular, golgi	92.75	91.43
TraesCS3B01G189200.1	Wheat	extracellular, golgi	92.75	91.43
GSMUA_AchrUn_...	Banana	golgi, mitochondrion, plastid, vacuole	44.93	64.58
TraesCS1A01G130500.1	Wheat	extracellular, golgi	55.07	54.29
VIT_08s0056g01050.t01	Wine grape	extracellular, golgi	43.48	49.18
AGP50810	Barley	plasma membrane	56.52	23.93
Solyc11g021230.1.1	Tomato	plastid	53.62	19.79
CDY03034	Canola	plasma membrane	52.17	16.74
Solyc02g011790.1.1	Tomato	extracellular, plasma membrane, vacuole	8.7	4.65
Solyc11g050760.1.1	Tomato	peroxisome, plastid, vacuole	1.45	0.88
TraesCS3A01G456900.1	Wheat	golgi, mitochondrion, vacuole	0.0	0.0
TraesCS3A01G430400.1	Wheat	endoplasmic reticulum, golgi, vacuole	0.0	0.0
TraesCS4A01G069900.1	Wheat	golgi, mitochondrion, vacuole	0.0	0.0
TraesCS1A01G098600.1	Wheat	mitochondrion	0.0	0.0
TraesCS4A01G360300.1	Wheat	golgi, mitochondrion, vacuole	0.0	0.0
TraesCS4A01G360500.1	Wheat	golgi, mitochondrion, vacuole	0.0	0.0
TraesCS4A01G360600.1	Wheat	mitochondrion	0.0	0.0
TraesCS6A01G114500.1	Wheat	mitochondrion	0.0	0.0
TraesCS6A01G397300.1	Wheat	endoplasmic reticulum, golgi, vacuole	0.0	0.0
TraesCS7A01G080700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	0.0	0.0
TraesCS7A01G388200.1	Wheat	golgi	0.0	0.0
VIT_08s0056g01060.t01	Wine grape	vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7A01G290700.1	EnsemblPlantsGene:TraesCS7A01G290700	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0055114	InterPro:NADH_UbQ_OxRdtase_su1/FPO	PANTHER:PTHR11432	PANTHER:PTHR11432:SF13	PFAM:PF00146	SEG:seg
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:352677351..352677560

Molecular Weight (calculated)

7903.2 Da

IEP (calculated)

10.871

GRAVY (calculated)

0.941

Length

69 amino acids

Sequence
(BLAST)

1: MNKALAILEM TMGIFITLTK AYLFLFISIT IRWTLPRMRM DQLLNLGWIF LPISLGNLLL TTSSQLVSL

Best Arabidopsis Sequence Match ( ATCG01100.1 )
(BLAST)

001: MIIYATAVQT INSFVKLESL KEVYGLIWIF VPIFSLVLGI ITGVLVIVWL EREISAGIQQ RIGPEYAGPL GILQALADGT KLLFKENLRP SRGNTPLFSI
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL

Arabidopsis Description

NDHANAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q37165]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.