Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G039110.1 | Barley | extracellular, golgi, vacuole | 50.88 | 82.86 |
| AT2G07785.1 | Thale cress | golgi, mitochondrion, plastid, vacuole | 82.46 | 47.47 |
| HORVU4Hr1G052660.1 | Barley | golgi, mitochondrion, vacuole | 84.21 | 47.06 |
| HORVU2Hr1G004300.1 | Barley | golgi, mitochondrion, plastid, vacuole | 82.46 | 46.08 |
| VIT_00s0396g00020.t01 | Wine grape | plastid | 78.95 | 45.45 |
| HORVU0Hr1G019930.1 | Barley | golgi, mitochondrion, vacuole | 84.21 | 39.02 |
| Solyc05g023920.1.1 | Tomato | plastid | 66.67 | 38.38 |
| GSMUA_AchrUn_... | Banana | golgi | 80.7 | 37.4 |
| ATMG01275.1 | Thale cress | endoplasmic reticulum | 82.46 | 36.43 |
| TraesCS6B01G338500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 85.96 | 34.03 |
| TraesCS1D01G258700.1 | Wheat | mitochondrion | 85.96 | 30.43 |
| CDY45488 | Canola | golgi, mitochondrion, nucleus, plastid | 84.21 | 30.19 |
| CDY36712 | Canola | golgi, mitochondrion, nucleus, plastid | 84.21 | 30.19 |
| HORVU4Hr1G027700.1 | Barley | vacuole | 15.79 | 6.52 |
| HORVU7Hr1G107860.1 | Barley | plasma membrane | 28.07 | 5.59 |
| HORVU1Hr1G048090.1 | Barley | vacuole | 28.07 | 4.42 |
| HORVU5Hr1G064770.1 | Barley | vacuole | 28.07 | 4.42 |
| HORVU3Hr1G075010.1 | Barley | cytosol, golgi, plasma membrane | 0.0 | 0.0 |
| HORVU5Hr1G005420.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU6Hr1G087850.1 | Barley | extracellular, plasma membrane | 0.0 | 0.0 |
| AGP50810 | Barley | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G044940.1 | EnsemblPlantsGene:HORVU3Hr1G044940 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF14 | PFAM:PF00146 | TMHMM:TMhelix |
| UniParc:UPI000B47AF60 | UniProt:A0A287KXI4 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:292635679..292635983
Molecular Weight (calculated)
5972.4 Da
IEP (calculated)
4.109
GRAVY (calculated)
1.056
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MALVATFMLS PVARVVVTFD YGMVLSDPNI GLLYLFAISS LGVYGITIAG WSSQTGG
001: TYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
101: SDPNIGLLYL FAISSLGVYG IIIAGRSSN
Arabidopsis Description
NAD1ANADH dehydrogenase 1A [Source:TAIR;Acc:ATMG01275]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.