Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G064770.1 | Barley | vacuole | 99.17 | 99.17 |
| HORVU7Hr1G107860.1 | Barley | plasma membrane | 77.62 | 98.25 |
| TraesCS2D01G557100.1 | Wheat | plastid | 50.28 | 97.33 |
| CAA33910 | Rice | vacuole | 96.41 | 96.41 |
| GRMZM5G874448_P01 | Maize | plastid | 95.86 | 95.86 |
| HORVU3Hr1G075010.1 | Barley | cytosol, golgi, plasma membrane | 18.78 | 91.89 |
| HORVU4Hr1G027700.1 | Barley | vacuole | 34.25 | 89.86 |
| ATCG01100.1 | Thale cress | plasma membrane | 78.18 | 78.61 |
| CDY14838 | Canola | plasma membrane | 68.51 | 78.48 |
| CDX95227 | Canola | plasma membrane | 68.51 | 78.48 |
| CDY21196 | Canola | plasma membrane | 68.51 | 78.48 |
| CDY19661 | Canola | plasma membrane | 68.51 | 78.48 |
| PGSC0003DMT400022653 | Potato | vacuole | 29.28 | 77.37 |
| HORVU6Hr1G087850.1 | Barley | extracellular, plasma membrane | 13.54 | 74.24 |
| HORVU5Hr1G005420.1 | Barley | cytosol | 14.09 | 71.83 |
| Solyc02g011800.1.1 | Tomato | plasma membrane | 26.24 | 69.34 |
| KRG99585 | Soybean | endoplasmic reticulum, plasma membrane | 29.28 | 61.99 |
| KRG99456 | Soybean | peroxisome, plasma membrane | 25.14 | 47.4 |
| HORVU4Hr1G052660.1 | Barley | golgi, mitochondrion, vacuole | 11.6 | 41.18 |
| HORVU2Hr1G004300.1 | Barley | golgi, mitochondrion, plastid, vacuole | 11.05 | 39.22 |
| HORVU0Hr1G019930.1 | Barley | golgi, mitochondrion, vacuole | 12.43 | 36.59 |
| AGP50810 | Barley | plasma membrane | 15.47 | 34.36 |
| HORVU6Hr1G039110.1 | Barley | extracellular, golgi, vacuole | 3.31 | 34.29 |
| HORVU3Hr1G044940.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 4.42 | 28.07 |
Protein Annotations
| MapMan:1.1.8.1.1.1 | EntrezGene:4525172 | UniProt:A0A125QY00 | ProteinID:AMA20301.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005886 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009535 |
| GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0016655 | GO:GO:0019684 | GO:GO:0048038 | GO:GO:0055114 | EnsemblPlantsGene:HORVU1Hr1G048090 |
| EnsemblPlants:HORVU1Hr1G048090.1 | HAMAP:MF_01350 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | InterPro:NADH_UbQ_OxRdtase_su1_CS | PFAM:PF00146 | ScanProsite:PS00667 |
| ScanProsite:PS00668 | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF13 | TMHMM:TMhelix | UniParc:UPI000009958E | RefSeq:YP_874707.1 |
| SEG:seg | : | : | : | : | : |
Description
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A125QY00]
Coordinates
chrchr1H:+:355729639..355731759
Molecular Weight (calculated)
40236.8 Da
IEP (calculated)
4.526
GRAVY (calculated)
0.752
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIDRVEVET INSFSKSELL KEVYGLISIL PILTLLLGIT IEVLVIVWLE REISASIQQR IGPEYAGPLG LLQAIADGTK LLFKEDILPS RGDISLFSIG
101: PSIAVISVLL SFLVIPLGYH FVLADLSIGV FLWIAISSIA PIGLLMAGYS SNNKYSFSGG LRAAAQSISY EIPLTFCVLA ISLLSNSSST VDIVEAQSKY
201: GFFGWNIWRQ PIGFLVFLIS SLAECERLPF DLPEAEEELV AGYQTEYSGI KYGLFYLVSY LNLLVSSLFV TVLYLGGWNF SIPYISFFDF FQMNKAVGIL
301: EMTMGIFITL TKAYLFLFIS ITIRWTLPRM RMDQLLNLGW KFLLPISLGN LLLTTSSQLV SL
101: PSIAVISVLL SFLVIPLGYH FVLADLSIGV FLWIAISSIA PIGLLMAGYS SNNKYSFSGG LRAAAQSISY EIPLTFCVLA ISLLSNSSST VDIVEAQSKY
201: GFFGWNIWRQ PIGFLVFLIS SLAECERLPF DLPEAEEELV AGYQTEYSGI KYGLFYLVSY LNLLVSSLFV TVLYLGGWNF SIPYISFFDF FQMNKAVGIL
301: EMTMGIFITL TKAYLFLFIS ITIRWTLPRM RMDQLLNLGW KFLLPISLGN LLLTTSSQLV SL
001: MIIYATAVQT INSFVKLESL KEVYGLIWIF VPIFSLVLGI ITGVLVIVWL EREISAGIQQ RIGPEYAGPL GILQALADGT KLLFKENLRP SRGNTPLFSI
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL
101: GPSIAVISIL LSYSVIPFSN HLVLADLNIG IFLWIAISSI APIGLLMSGY GSNNKYSFLG GLRAAAQSIS YEIPLTLCVL SISLLSNSLS TVDIVEAQSK
201: YGFWGWNLWR QPIGFIIFLI SSLAECERLP FDLPEAEEEL IAGYQTEYSG IKFGLFYVAS YLNLLISSLF VTVLYLGGWN ISIPYISILE LFQRDQIFGT
301: TIGIFITLAK TYLFLFVSIA TRWTLPRLRM DQLLNLGWKF LLPISLGNLL LTTSFQLFSL
Arabidopsis Description
NDHANAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q37165]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.