Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7D01G532600.1 | Wheat | cytosol | 97.62 | 98.8 |
TraesCS7A01G546400.1 | Wheat | cytosol | 97.62 | 98.8 |
Zm00001d038839_P002 | Maize | mitochondrion | 80.95 | 85.0 |
KXG22420 | Sorghum | cytosol | 80.95 | 85.0 |
Os05t0122900-01 | Rice | cytosol | 80.95 | 83.95 |
Os06t0725400-01 | Rice | cytosol, mitochondrion, peroxisome | 71.43 | 82.19 |
VIT_18s0001g00230.t01 | Wine grape | cytosol, extracellular, golgi, mitochondrion | 46.43 | 73.58 |
KRH24165 | Soybean | cytosol | 57.14 | 71.64 |
KRH29130 | Soybean | cytosol | 57.14 | 71.64 |
CDX87629 | Canola | cytosol | 55.95 | 70.15 |
CDX73242 | Canola | cytosol | 55.95 | 70.15 |
CDY46007 | Canola | cytosol | 50.0 | 70.0 |
Zm00001d011136_P001 | Maize | cytosol | 75.0 | 70.0 |
GSMUA_Achr9P21130_001 | Banana | cytosol | 63.1 | 69.74 |
AT1G76200.1 | Thale cress | cytosol | 57.14 | 69.57 |
Bra003730.1-P | Field mustard | cytosol | 52.38 | 67.69 |
CDX68107 | Canola | cytosol | 53.57 | 67.16 |
PGSC0003DMT400025629 | Potato | cytosol | 51.19 | 66.15 |
CDX85939 | Canola | cytosol | 50.0 | 64.62 |
CDY50906 | Canola | cytosol | 42.86 | 63.16 |
GSMUA_Achr1P07350_001 | Banana | cytosol | 58.33 | 62.82 |
GSMUA_Achr2P03600_001 | Banana | cytosol | 58.33 | 54.44 |
Protein Annotations
EnsemblPlants:TraesCS7B01G469400.1 | EnsemblPlantsGene:TraesCS7B01G469400 | PANTHER:PTHR36987 | SEG:seg | MapMan:2.4.1.4.2.1 | : |
Description
No Description!
Coordinates
chr7B:+:726136352..726139145
Molecular Weight (calculated)
9153.6 Da
IEP (calculated)
8.551
GRAVY (calculated)
-0.771
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGGGGAHGG TTYKGYTIPH NKRWHTIAGK GLCATMWFWI FYRAKQDGAV LLGMRHPWDG HDDHAHGHGH AHEHEASSSS SPSH
1: MGGGGHGGGI TYKGVTVHTP KTWHTVTGKG LCAVMWFWIL YRAKQDGPVV MGWRHPWDGH GDHGHGDHH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDK3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.