Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 1
- plastid 1
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24165 | Soybean | cytosol | 95.52 | 95.52 |
| VIT_18s0001g00230.t01 | Wine grape | cytosol, extracellular, golgi, mitochondrion | 65.67 | 83.02 |
| PGSC0003DMT400025629 | Potato | cytosol | 74.63 | 76.92 |
| AT1G76200.1 | Thale cress | cytosol | 79.1 | 76.81 |
| CDY46007 | Canola | cytosol | 65.67 | 73.33 |
| CDX73242 | Canola | cytosol | 73.13 | 73.13 |
| CDX87629 | Canola | cytosol | 73.13 | 73.13 |
| Bra003730.1-P | Field mustard | cytosol | 67.16 | 69.23 |
| CDX68107 | Canola | cytosol | 68.66 | 68.66 |
| GSMUA_Achr9P21130_001 | Banana | cytosol | 77.61 | 68.42 |
| CDY50906 | Canola | cytosol | 58.21 | 68.42 |
| GSMUA_Achr1P07350_001 | Banana | cytosol | 77.61 | 66.67 |
| CDX85939 | Canola | cytosol | 64.18 | 66.15 |
| Os06t0725400-01 | Rice | cytosol, mitochondrion, peroxisome | 68.66 | 63.01 |
| Os05t0122900-01 | Rice | cytosol | 76.12 | 62.96 |
| KXG22420 | Sorghum | cytosol | 71.64 | 60.0 |
| Zm00001d038839_P002 | Maize | mitochondrion | 71.64 | 60.0 |
| TraesCS7A01G546400.1 | Wheat | cytosol | 71.64 | 57.83 |
| TraesCS7D01G532600.1 | Wheat | cytosol | 71.64 | 57.83 |
| TraesCS7B01G469400.1 | Wheat | cytosol | 71.64 | 57.14 |
| GSMUA_Achr2P03600_001 | Banana | cytosol | 76.12 | 56.67 |
| Zm00001d011136_P001 | Maize | cytosol | 71.64 | 53.33 |
Protein Annotations
| EMBL:ACUP02006786 | EnsemblPlants:KRH29130 | EnsemblPlantsGene:GLYMA_11G099500 | EntrezGene:100499828 | PANTHER:PTHR36987 | ProteinID:KRH29130 |
| ProteinID:KRH29130.1 | SEG:seg | UniParc:UPI00023CCC25 | UniProt:I1LIR4 | MapMan:2.4.1.4.2.1 | : |
Description
hypothetical protein
Coordinates
chr11:-:7545960..7548467
Molecular Weight (calculated)
7634.1 Da
IEP (calculated)
10.172
GRAVY (calculated)
-0.751
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGGHGHGTT YKGVTVHHPK RWHTITGKGL CAVMWFWVFY RAKQDGPVVL GWRHPWEGHH DDHGKGH
1: MGGGGHGGGI TYKGVTVHTP KTWHTVTGKG LCAVMWFWIL YRAKQDGPVV MGWRHPWDGH GDHGHGDHH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDK3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.