Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46007 | Canola | cytosol | 91.23 | 86.67 |
| Bra003730.1-P | Field mustard | cytosol | 91.23 | 80.0 |
| CDX68107 | Canola | cytosol | 89.47 | 76.12 |
| CDX73242 | Canola | cytosol | 89.47 | 76.12 |
| CDX87629 | Canola | cytosol | 89.47 | 76.12 |
| CDX85939 | Canola | cytosol | 85.96 | 75.38 |
| AT1G76200.1 | Thale cress | cytosol | 85.96 | 71.01 |
| PGSC0003DMT400025629 | Potato | cytosol | 66.67 | 58.46 |
| KRH29130 | Soybean | cytosol | 68.42 | 58.21 |
| KRH24165 | Soybean | cytosol | 66.67 | 56.72 |
| VIT_18s0001g00230.t01 | Wine grape | cytosol, extracellular, golgi, mitochondrion | 50.88 | 54.72 |
| GSMUA_Achr9P21130_001 | Banana | cytosol | 68.42 | 51.32 |
| Os06t0725400-01 | Rice | cytosol, mitochondrion, peroxisome | 61.4 | 47.95 |
| Os05t0122900-01 | Rice | cytosol | 66.67 | 46.91 |
| KXG22420 | Sorghum | cytosol | 64.91 | 46.25 |
| Zm00001d038839_P002 | Maize | mitochondrion | 64.91 | 46.25 |
| GSMUA_Achr1P07350_001 | Banana | cytosol | 63.16 | 46.15 |
| TraesCS7A01G546400.1 | Wheat | cytosol | 64.91 | 44.58 |
| TraesCS7D01G532600.1 | Wheat | cytosol | 64.91 | 44.58 |
| TraesCS7B01G469400.1 | Wheat | cytosol | 63.16 | 42.86 |
| GSMUA_Achr2P03600_001 | Banana | cytosol | 63.16 | 40.0 |
| Zm00001d011136_P001 | Maize | cytosol | 63.16 | 40.0 |
Protein Annotations
| EnsemblPlants:CDY50906 | EnsemblPlantsGene:GSBRNA2T00097752001 | GO:A0A078ILM9 | PANTHER:PTHR36987 | ProteinID:CDY50906 | ProteinID:CDY50906.1 |
| UniParc:UPI0004EEF7F1 | UniProt:A0A078ILM9 | MapMan:2.4.1.4.2.1 | : | : | : |
Description
BnaCnng19980DBnaCnng19980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILM9]
Coordinates
chrLK032947:-:85869..87075
Molecular Weight (calculated)
6297.7 Da
IEP (calculated)
10.173
GRAVY (calculated)
-0.274
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGGGIAYKG VTVQTPKTWH TVAGKGLCGV MFWILYRAKQ DGPVVMGWRH PWDHGEK
1: MGGGGHGGGI TYKGVTVHTP KTWHTVTGKG LCAVMWFWIL YRAKQDGPVV MGWRHPWDGH GDHGHGDHH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDK3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.