Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra003730.1-P | Field mustard | cytosol | 95.52 | 98.46 |
CDY46007 | Canola | cytosol | 86.57 | 96.67 |
CDX73242 | Canola | cytosol | 95.52 | 95.52 |
CDX87629 | Canola | cytosol | 95.52 | 95.52 |
CDX85939 | Canola | cytosol | 91.04 | 93.85 |
CDY50906 | Canola | cytosol | 76.12 | 89.47 |
AT1G76200.1 | Thale cress | cytosol | 89.55 | 86.96 |
PGSC0003DMT400025629 | Potato | cytosol | 67.16 | 69.23 |
KRH29130 | Soybean | cytosol | 68.66 | 68.66 |
VIT_18s0001g00230.t01 | Wine grape | cytosol, extracellular, golgi, mitochondrion | 53.73 | 67.92 |
KRH24165 | Soybean | cytosol | 67.16 | 67.16 |
GSMUA_Achr9P21130_001 | Banana | cytosol | 74.63 | 65.79 |
Os06t0725400-01 | Rice | cytosol, mitochondrion, peroxisome | 65.67 | 60.27 |
Os05t0122900-01 | Rice | cytosol | 70.15 | 58.02 |
GSMUA_Achr1P07350_001 | Banana | cytosol | 67.16 | 57.69 |
KXG22420 | Sorghum | cytosol | 68.66 | 57.5 |
Zm00001d038839_P002 | Maize | mitochondrion | 68.66 | 57.5 |
TraesCS7A01G546400.1 | Wheat | cytosol | 68.66 | 55.42 |
TraesCS7D01G532600.1 | Wheat | cytosol | 68.66 | 55.42 |
TraesCS7B01G469400.1 | Wheat | cytosol | 67.16 | 53.57 |
GSMUA_Achr2P03600_001 | Banana | cytosol | 68.66 | 51.11 |
Zm00001d011136_P001 | Maize | cytosol | 65.67 | 48.89 |
Protein Annotations
EnsemblPlants:CDX68107 | EnsemblPlantsGene:GSBRNA2T00099349001 | GO:A0A078BV99 | PANTHER:PTHR36987 | ProteinID:CDX68107 | ProteinID:CDX68107.1 |
SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE86E4 | MapMan:2.4.1.4.2.1 | : | : |
Description
BnaA07g21470D
Coordinates
chrLK031787:-:3903775..3904935
Molecular Weight (calculated)
7290.7 Da
IEP (calculated)
9.242
GRAVY (calculated)
-0.461
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGGGGGITY KGVTVQTPKT WHAVAGKGLC GVMWFWILYR AKQDGPVVMG WRHPWDGHGD HGHGDHH
1: MGGGGHGGGI TYKGVTVHTP KTWHTVTGKG LCAVMWFWIL YRAKQDGPVV MGWRHPWDGH GDHGHGDHH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDK3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.