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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003730.1-P Field mustard cytosol 95.52 98.46
CDY46007 Canola cytosol 86.57 96.67
CDX73242 Canola cytosol 95.52 95.52
CDX87629 Canola cytosol 95.52 95.52
CDX85939 Canola cytosol 91.04 93.85
CDY50906 Canola cytosol 76.12 89.47
AT1G76200.1 Thale cress cytosol 89.55 86.96
PGSC0003DMT400025629 Potato cytosol 67.16 69.23
KRH29130 Soybean cytosol 68.66 68.66
VIT_18s0001g00230.t01 Wine grape cytosol, extracellular, golgi, mitochondrion 53.73 67.92
KRH24165 Soybean cytosol 67.16 67.16
GSMUA_Achr9P21130_001 Banana cytosol 74.63 65.79
Os06t0725400-01 Rice cytosol, mitochondrion, peroxisome 65.67 60.27
Os05t0122900-01 Rice cytosol 70.15 58.02
GSMUA_Achr1P07350_001 Banana cytosol 67.16 57.69
KXG22420 Sorghum cytosol 68.66 57.5
Zm00001d038839_P002 Maize mitochondrion 68.66 57.5
TraesCS7A01G546400.1 Wheat cytosol 68.66 55.42
TraesCS7D01G532600.1 Wheat cytosol 68.66 55.42
TraesCS7B01G469400.1 Wheat cytosol 67.16 53.57
GSMUA_Achr2P03600_001 Banana cytosol 68.66 51.11
Zm00001d011136_P001 Maize cytosol 65.67 48.89
Protein Annotations
EnsemblPlants:CDX68107EnsemblPlantsGene:GSBRNA2T00099349001GO:A0A078BV99PANTHER:PTHR36987ProteinID:CDX68107ProteinID:CDX68107.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EE86E4MapMan:2.4.1.4.2.1::
Description
BnaA07g21470D
Coordinates
chrLK031787:-:3903775..3904935
Molecular Weight (calculated)
7290.7 Da
IEP (calculated)
9.242
GRAVY (calculated)
-0.461
Length
67 amino acids
Sequence
(BLAST)
1: MGGGGGGITY KGVTVQTPKT WHAVAGKGLC GVMWFWILYR AKQDGPVVMG WRHPWDGHGD HGHGDHH
Best Arabidopsis Sequence Match ( AT1G76200.1 )
(BLAST)
1: MGGGGHGGGI TYKGVTVHTP KTWHTVTGKG LCAVMWFWIL YRAKQDGPVV MGWRHPWDGH GDHGHGDHH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDK3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.