Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G159600.1 | Wheat | golgi, unclear | 100.0 | 100.0 |
| TraesCS2A01G154100.1 | Wheat | cytosol | 100.0 | 100.0 |
| EES13880 | Sorghum | cytosol | 96.08 | 96.08 |
| TraesCS6B01G101700.1 | Wheat | cytosol | 95.1 | 95.1 |
| Zm00001d050384_P001 | Maize | mitochondrion | 95.1 | 94.17 |
| GSMUA_Achr5P24540_001 | Banana | cytosol | 85.29 | 86.14 |
| KRH11550 | Soybean | mitochondrion | 84.31 | 85.15 |
| KRH36573 | Soybean | cytosol, extracellular, peroxisome | 84.31 | 85.15 |
| VIT_19s0090g01760.t01 | Wine grape | cytosol | 83.33 | 85.0 |
| PGSC0003DMT400057110 | Potato | cytosol | 84.31 | 84.31 |
| Solyc07g065280.2.1 | Tomato | cytosol, nucleus, unclear | 84.31 | 84.31 |
| CDY62425 | Canola | cytosol, extracellular, peroxisome | 81.37 | 78.3 |
| CDY32249 | Canola | cytosol, extracellular, peroxisome | 81.37 | 78.3 |
| CDY09691 | Canola | cytosol, extracellular, peroxisome | 80.39 | 76.64 |
| CDX90521 | Canola | cytosol, extracellular, peroxisome | 80.39 | 76.64 |
| Bra012716.1-P | Field mustard | cytosol, extracellular, peroxisome | 80.39 | 76.64 |
| AT4G16450.1 | Thale cress | cytosol | 79.41 | 76.42 |
| Os08t0431500-01 | Rice | mitochondrion | 96.08 | 71.01 |
| Bra038466.1-P | Field mustard | cytosol, extracellular, peroxisome | 82.35 | 65.62 |
| HORVU2Hr1G027860.1 | Barley | mitochondrion | 96.08 | 56.32 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G179400.1 | EnsemblPlantsGene:TraesCS2B01G179400 | InterPro:NADH-UbQ_OxRdtase_su21_N | KEGG:00190+1.6.99.3+1.6.5.3 | PANTHER:PTHR34062 | PFAM:PF10785 |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:154140028..154140432
Molecular Weight (calculated)
11009.4 Da
IEP (calculated)
9.854
GRAVY (calculated)
0.123
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTDITASVK PEYPVVDRNP AFTKVVGNFS ALDYMRLSTI SAVSVTVGYL SGIKPGIRGP SMVTGGLIGV LGGFMYAYQN SAGRLMGFFP NESEVARYKY
101: KL
101: KL
001: MNTDITALEK AQYPVVDRNP AFTKVVGNFS TLDYLRFSTI TGISVTVGYL SGIKPGIKGP SMVTGGLIGL MGGFMYAYQN SAGRLMGFFP NDGEVASYQK
101: RGGFSK
101: RGGFSK
Arabidopsis Description
At4g16450 [Source:UniProtKB/TrEMBL;Acc:Q84W12]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.