Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62425 | Canola | cytosol, extracellular, peroxisome | 98.11 | 98.11 |
| CDX90521 | Canola | cytosol, extracellular, peroxisome | 96.23 | 95.33 |
| CDY09691 | Canola | cytosol, extracellular, peroxisome | 96.23 | 95.33 |
| AT4G16450.1 | Thale cress | cytosol | 95.28 | 95.28 |
| VIT_19s0090g01760.t01 | Wine grape | cytosol | 83.02 | 88.0 |
| KRH36573 | Soybean | cytosol, extracellular, peroxisome | 81.13 | 85.15 |
| KRH11550 | Soybean | mitochondrion | 81.13 | 85.15 |
| GSMUA_Achr5P24540_001 | Banana | cytosol | 80.19 | 84.16 |
| Solyc07g065280.2.1 | Tomato | cytosol, nucleus, unclear | 80.19 | 83.33 |
| PGSC0003DMT400057110 | Potato | cytosol | 79.25 | 82.35 |
| Bra038466.1-P | Field mustard | cytosol, extracellular, peroxisome | 99.06 | 82.03 |
| TraesCS2A01G154100.1 | Wheat | cytosol | 78.3 | 81.37 |
| TraesCS2B01G179400.1 | Wheat | cytosol | 78.3 | 81.37 |
| TraesCS2D01G159600.1 | Wheat | golgi, unclear | 78.3 | 81.37 |
| EES13880 | Sorghum | cytosol | 78.3 | 81.37 |
| Zm00001d050384_P001 | Maize | mitochondrion | 78.3 | 80.58 |
| TraesCS6B01G101700.1 | Wheat | cytosol | 76.42 | 79.41 |
| GSMUA_Achr3P07340_001 | Banana | cytosol | 72.64 | 77.78 |
| Os08t0431500-01 | Rice | mitochondrion | 80.19 | 61.59 |
| TraesCS6A01G076300.1 | Wheat | cytosol, nucleus, peroxisome | 79.25 | 58.74 |
| HORVU2Hr1G027860.1 | Barley | mitochondrion | 78.3 | 47.7 |
| HORVU6Hr1G013470.1 | Barley | peroxisome | 47.17 | 47.17 |
Protein Annotations
| EnsemblPlants:CDY32249 | EnsemblPlantsGene:GSBRNA2T00051690001 | InterPro:NADH-UbQ_OxRdtase_su21_N | KEGG:00190+1.6.99.3+1.6.5.3 | MetaCyc:PWY-3781 | MetaCyc:PWY-4302 |
| MetaCyc:PWY-5083 | MetaCyc:PWY-6692 | PANTHER:PTHR34062 | PFAM:PF10785 | ProteinID:CDY32249 | ProteinID:CDY32249.1 |
| UniParc:UPI0004EF1CA4 | UniProt:A0A078H4C5 | MapMan:35.2 | : | : | : |
Description
BnaA01g17350DBnaA01g17350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4C5]
Coordinates
chrLK032290:+:253553..254377
Molecular Weight (calculated)
11395.9 Da
IEP (calculated)
9.910
GRAVY (calculated)
0.003
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTDITALEK PQYPVVDRNP PFTKVVGNFS VLDYLRFSTI TGVSVTVGYL SGIKPGIKGP SMVTGGLIGL MGGFMYAYQN SAGRLMGFFP NEGEVASYQK
101: RGGFSK
101: RGGFSK
001: MNTDITALEK AQYPVVDRNP AFTKVVGNFS TLDYLRFSTI TGISVTVGYL SGIKPGIKGP SMVTGGLIGL MGGFMYAYQN SAGRLMGFFP NDGEVASYQK
101: RGGFSK
101: RGGFSK
Arabidopsis Description
At4g16450 [Source:UniProtKB/TrEMBL;Acc:Q84W12]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.