Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32249 | Canola | cytosol, extracellular, peroxisome | 95.28 | 95.28 |
| CDY62425 | Canola | cytosol, extracellular, peroxisome | 93.4 | 93.4 |
| Bra012716.1-P | Field mustard | cytosol, extracellular, peroxisome | 91.51 | 90.65 |
| CDX90521 | Canola | cytosol, extracellular, peroxisome | 91.51 | 90.65 |
| CDY09691 | Canola | cytosol, extracellular, peroxisome | 91.51 | 90.65 |
| KRH11550 | Soybean | mitochondrion | 80.19 | 84.16 |
| KRH36573 | Soybean | cytosol, extracellular, peroxisome | 80.19 | 84.16 |
| VIT_19s0090g01760.t01 | Wine grape | cytosol | 79.25 | 84.0 |
| GSMUA_Achr5P24540_001 | Banana | cytosol | 79.25 | 83.17 |
| Solyc07g065280.2.1 | Tomato | cytosol, nucleus, unclear | 79.25 | 82.35 |
| EES13880 | Sorghum | cytosol | 78.3 | 81.37 |
| PGSC0003DMT400057110 | Potato | cytosol | 78.3 | 81.37 |
| Zm00001d050384_P001 | Maize | mitochondrion | 78.3 | 80.58 |
| TraesCS2A01G154100.1 | Wheat | cytosol | 76.42 | 79.41 |
| TraesCS2B01G179400.1 | Wheat | cytosol | 76.42 | 79.41 |
| TraesCS2D01G159600.1 | Wheat | golgi, unclear | 76.42 | 79.41 |
| TraesCS6B01G101700.1 | Wheat | cytosol | 75.47 | 78.43 |
| Bra038466.1-P | Field mustard | cytosol, extracellular, peroxisome | 94.34 | 78.12 |
| GSMUA_Achr3P07340_001 | Banana | cytosol | 71.7 | 76.77 |
| Os08t0431500-01 | Rice | mitochondrion | 78.3 | 60.14 |
| TraesCS6A01G076300.1 | Wheat | cytosol, nucleus, peroxisome | 76.42 | 56.64 |
| HORVU6Hr1G013470.1 | Barley | peroxisome | 48.11 | 48.11 |
| HORVU2Hr1G027860.1 | Barley | mitochondrion | 76.42 | 46.55 |
Protein Annotations
| KEGG:00190+1.6.99.3+1.6.5.3 | MapMan:35.2 | EntrezGene:827343 | ProteinID:AEE83752.1 | ProteinID:AEE83753.1 | EMBL:AK227352 |
| ArrayExpress:AT4G16450 | EnsemblPlantsGene:AT4G16450 | RefSeq:AT4G16450 | TAIR:AT4G16450 | RefSeq:AT4G16450-TAIR-G | EnsemblPlants:AT4G16450.1 |
| TAIR:AT4G16450.1 | Unigene:At.33078 | EMBL:BT004558 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009853 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0031966 | GO:GO:0045271 | InterPro:NADH-UbQ_OxRdtase_su21_N | RefSeq:NP_001190742.1 |
| RefSeq:NP_567500.2 | PFAM:PF10785 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR34062 | UniProt:Q84W12 | UniParc:UPI000000C3AD | : | : | : |
Description
At4g16450 [Source:UniProtKB/TrEMBL;Acc:Q84W12]
Coordinates
chr4:+:9279909..9280901
Molecular Weight (calculated)
11345.7 Da
IEP (calculated)
9.910
GRAVY (calculated)
0.024
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTDITALEK AQYPVVDRNP AFTKVVGNFS TLDYLRFSTI TGISVTVGYL SGIKPGIKGP SMVTGGLIGL MGGFMYAYQN SAGRLMGFFP NDGEVASYQK
101: RGGFSK
101: RGGFSK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.