Factsheet for Zm00001d050384_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13880	Sorghum	cytosol	98.06	99.02
TraesCS2D01G159600.1	Wheat	golgi, unclear	94.17	95.1
TraesCS2B01G179400.1	Wheat	cytosol	94.17	95.1
TraesCS2A01G154100.1	Wheat	cytosol	94.17	95.1
TraesCS6B01G101700.1	Wheat	cytosol	89.32	90.2
KRH36573	Soybean	cytosol, extracellular, peroxisome	86.41	88.12
KRH11550	Soybean	mitochondrion	86.41	88.12
GSMUA_Achr5P24540_001	Banana	cytosol	83.5	85.15
VIT_19s0090g01760.t01	Wine grape	cytosol	82.52	85.0
PGSC0003DMT400057110	Potato	cytosol	82.52	83.33
Solyc07g065280.2.1	Tomato	cytosol, nucleus, unclear	82.52	83.33
CDY62425	Canola	cytosol, extracellular, peroxisome	80.58	78.3
CDY32249	Canola	cytosol, extracellular, peroxisome	80.58	78.3
AT4G16450.1	Thale cress	cytosol	80.58	78.3
CDY09691	Canola	cytosol, extracellular, peroxisome	79.61	76.64
CDX90521	Canola	cytosol, extracellular, peroxisome	79.61	76.64
Bra012716.1-P	Field mustard	cytosol, extracellular, peroxisome	79.61	76.64
Os08t0431500-01	Rice	mitochondrion	94.17	70.29
Bra038466.1-P	Field mustard	cytosol, extracellular, peroxisome	81.55	65.62
TraesCS6A01G076300.1	Wheat	cytosol, nucleus, peroxisome	88.35	63.64
HORVU2Hr1G027860.1	Barley	mitochondrion	91.26	54.02
HORVU6Hr1G013470.1	Barley	peroxisome	47.57	46.23

Protein Annotations

KEGG:00190+1.6.99.3+1.6.5.3	EntrezGene:100275334	MapMan:35.2	ProteinID:AQK52454.1	UniProt:B6SRG1	EMBL:BT063210
EMBL:EU955326	EMBL:EU965103	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005747	GO:GO:0016020	GO:GO:0016021	GO:GO:0031966	GO:GO:0045271
InterPro:NADH-UbQ_OxRdtase_su21_N	PFAM:PF10785	PANTHER:PTHR34062	TMHMM:TMhelix	UniParc:UPI000182B1E9	EnsemblPlantsGene:Zm00001d050384
EnsemblPlants:Zm00001d050384_P001	EnsemblPlants:Zm00001d050384_T001	:	:	:	:

Description

No Description!

Coordinates

chr4:+:85019366..85020259

Molecular Weight (calculated)

11110.5 Da

IEP (calculated)

9.934

GRAVY (calculated)

0.031

Length

103 amino acids

Sequence
(BLAST)

001: MNTDITASTK PEYPVVDRNP AFTKVVGNFS ALDYMRLSTI SAVSVTVGYL SGIKPGIRGP SMVTGGLIGV MGGFMYAYQN SAGRLMGFFP NDAEVARYKH
101: KLH

Best Arabidopsis Sequence Match ( AT4G16450.1 )
(BLAST)

001: MNTDITALEK AQYPVVDRNP AFTKVVGNFS TLDYLRFSTI TGISVTVGYL SGIKPGIKGP SMVTGGLIGL MGGFMYAYQN SAGRLMGFFP NDGEVASYQK
101: RGGFSK

Arabidopsis Description

At4g16450 [Source:UniProtKB/TrEMBL;Acc:Q84W12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.