Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11550 | Soybean | mitochondrion | 91.0 | 90.1 |
| KRH36573 | Soybean | cytosol, extracellular, peroxisome | 91.0 | 90.1 |
| GSMUA_Achr5P24540_001 | Banana | cytosol | 87.0 | 86.14 |
| TraesCS2D01G159600.1 | Wheat | golgi, unclear | 85.0 | 83.33 |
| TraesCS2B01G179400.1 | Wheat | cytosol | 85.0 | 83.33 |
| TraesCS2A01G154100.1 | Wheat | cytosol | 85.0 | 83.33 |
| EES13880 | Sorghum | cytosol | 85.0 | 83.33 |
| CDY32249 | Canola | cytosol, extracellular, peroxisome | 88.0 | 83.02 |
| CDY62425 | Canola | cytosol, extracellular, peroxisome | 88.0 | 83.02 |
| Zm00001d050384_P001 | Maize | mitochondrion | 85.0 | 82.52 |
| Solyc07g065280.2.1 | Tomato | cytosol, nucleus, unclear | 84.0 | 82.35 |
| PGSC0003DMT400057110 | Potato | cytosol | 84.0 | 82.35 |
| GSMUA_Achr3P07340_001 | Banana | cytosol | 81.0 | 81.82 |
| Bra012716.1-P | Field mustard | cytosol, extracellular, peroxisome | 87.0 | 81.31 |
| CDY09691 | Canola | cytosol, extracellular, peroxisome | 87.0 | 81.31 |
| CDX90521 | Canola | cytosol, extracellular, peroxisome | 87.0 | 81.31 |
| TraesCS6B01G101700.1 | Wheat | cytosol | 82.0 | 80.39 |
| AT4G16450.1 | Thale cress | cytosol | 84.0 | 79.25 |
| Bra038466.1-P | Field mustard | cytosol, extracellular, peroxisome | 88.0 | 68.75 |
| Os08t0431500-01 | Rice | mitochondrion | 87.0 | 63.04 |
| TraesCS6A01G076300.1 | Wheat | cytosol, nucleus, peroxisome | 85.0 | 59.44 |
| HORVU2Hr1G027860.1 | Barley | mitochondrion | 84.0 | 48.28 |
| HORVU6Hr1G013470.1 | Barley | peroxisome | 47.0 | 44.34 |
Protein Annotations
| KEGG:00190+1.6.99.3+1.6.5.3 | EntrezGene:100255436 | wikigene:100255436 | MapMan:35.2 | EMBL:AM476244 | ProteinID:CAN72866 |
| ProteinID:CAN72866.1 | ProteinID:CBI26740 | ProteinID:CBI26740.3 | UniProt:D7T881 | EMBL:FN595751 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0031966 | GO:GO:0045271 | EntrezGene:LOC100255436 | wikigene:LOC100255436 | InterPro:NADH-UbQ_OxRdtase_su21_N |
| PFAM:PF10785 | PANTHER:PTHR34062 | TIGR:TC68673 | TMHMM:TMhelix | UniParc:UPI00015C747B | ArrayExpress:VIT_19s0090g01760 |
| EnsemblPlantsGene:VIT_19s0090g01760 | EnsemblPlants:VIT_19s0090g01760.t01 | RefSeq:XP_002274004 | RefSeq:XP_002274004.1 | : | : |
Description
No Description!
Coordinates
chr19:-:7784238..7785574
Molecular Weight (calculated)
10913.3 Da
IEP (calculated)
9.697
GRAVY (calculated)
-0.034
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MNTDITASEK PQYPVIDRNP PLTKVVGNFS ALDYLRFVTI TGVSVTVGYL SGIKPNIRGP SMVTGGLIGI MGGFMYAYQN SAGRLMGFFP NEDEVARYKK
001: MNTDITALEK AQYPVVDRNP AFTKVVGNFS TLDYLRFSTI TGISVTVGYL SGIKPGIKGP SMVTGGLIGL MGGFMYAYQN SAGRLMGFFP NDGEVASYQK
101: RGGFSK
101: RGGFSK
Arabidopsis Description
At4g16450 [Source:UniProtKB/TrEMBL;Acc:Q84W12]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.