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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 2
  • mitochondrion 2
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400026783 Potato cytosol, mitochondrion, nucleus, plastid, vacuole 94.35 82.66
Solyc02g031710.2.1 Tomato nucleus 61.84 56.45
VIT_10s0042g01070.t01 Wine grape nucleus 47.35 44.22
KRH36722 Soybean nucleus 44.88 40.97
KRH11729 Soybean nucleus 44.88 40.58
KRH50476 Soybean cytosol, nucleus, plastid 43.11 38.12
KRG89416 Soybean nucleus 42.05 37.9
GSMUA_Achr2P13160_001 Banana plastid 31.8 36.44
AT5G45100.1 Thale cress cytosol 36.75 35.37
GSMUA_Achr7P00850_001 Banana plastid 28.62 35.22
CDY09318 Canola cytosol 28.62 34.62
CDX94520 Canola cytosol 28.62 34.62
CDY21311 Canola cytosol 28.62 34.62
CDY07541 Canola cytosol 28.62 34.62
GSMUA_Achr4P32070_001 Banana nucleus 34.63 34.27
Bra039533.1-P Field mustard cytosol, nucleus, plastid 35.69 34.12
CDY26402 Canola cytosol 35.69 34.12
Bra013423.1-P Field mustard nucleus 33.92 32.43
AT4G19700.1 Thale cress cytosol 34.63 32.24
GSMUA_Achr6P31690_001 Banana nucleus 33.92 32.21
GSMUA_Achr5P02100_001 Banana plastid 27.56 31.97
CDY51918 Canola cytosol 31.8 31.36
GSMUA_Achr4P28300_001 Banana nucleus 26.5 31.12
CDY71607 Canola cytosol 32.86 30.39
Bra012532.1-P Field mustard nucleus 32.86 30.39
CDY01615 Canola cytosol 32.51 30.16
Bra028364.1-P Field mustard cytosol, nucleus, plastid 30.04 30.14
Bra027588.1-P Field mustard cytosol, nucleus, plastid 29.68 30.11
CDY71192 Canola cytosol 29.68 30.0
CDY18062 Canola cytosol 29.68 29.79
CDY13070 Canola cytosol 29.33 29.75
GSMUA_Achr9P09830_001 Banana nucleus 32.86 28.97
GSMUA_Achr4P23050_001 Banana nucleus 19.08 28.72
CDY46345 Canola cytosol 28.62 28.72
Zm00001d033419_P001 Maize plastid 25.09 25.36
TraesCS7D01G431300.1 Wheat mitochondrion 27.56 24.92
TraesCS3A01G448500.1 Wheat mitochondrion 25.8 24.91
TraesCS3D01G441300.1 Wheat mitochondrion 24.73 24.14
TraesCS7B01G340600.1 Wheat mitochondrion 26.5 24.04
HORVU7Hr1G100540.2 Barley mitochondrion 25.8 24.01
EER91098 Sorghum nucleus 30.04 23.94
TraesCS3D01G441000.1 Wheat mitochondrion 24.38 23.79
TraesCS7B01G340700.1 Wheat mitochondrion 26.15 23.72
TraesCS3B01G484600.1 Wheat cytosol 22.97 23.64
TraesCS7A01G442100.1 Wheat mitochondrion 25.8 23.25
TraesCS4B01G019600.1 Wheat mitochondrion 25.44 23.23
TraesCS7B01G340500.1 Wheat mitochondrion 25.8 23.17
HORVU7Hr1G100520.1 Barley cytosol, mitochondrion 25.09 23.13
HORVU4Hr1G003180.3 Barley mitochondrion 25.09 23.13
TraesCS7A01G442300.1 Wheat mitochondrion 25.8 23.03
TraesCS6A01G079900.1 Wheat cytosol, mitochondrion, plastid 19.43 23.01
TraesCS4D01G018100.1 Wheat mitochondrion, nucleus 24.38 22.77
TraesCS7D01G431100.1 Wheat mitochondrion, nucleus 25.09 22.61
HORVU6Hr1G021880.1 Barley plastid 20.85 22.61
HORVU6Hr1G021960.1 Barley plastid 20.85 22.61
Zm00001d013571_P001 Maize cytosol, nucleus, plastid 26.15 22.42
TraesCS7A01G441900.1 Wheat mitochondrion 24.73 22.15
TraesCS4A01G293700.1 Wheat mitochondrion 24.03 22.08
TraesCS7D01G431200.1 Wheat mitochondrion 24.03 22.08
TraesCS6D01G110700.1 Wheat nucleus 19.79 21.29
TraesCS6D01G073600.1 Wheat cytosol, nucleus, plastid 20.14 21.03
Solyc01g111610.2.1 Tomato cytosol 18.02 20.99
TraesCS6B01G149100.1 Wheat nucleus 18.73 20.15
TraesCS6A01G120700.1 Wheat nucleus 18.73 20.15
Solyc10g055560.1.1 Tomato nucleus 16.96 17.78
Solyc08g007120.2.1 Tomato nucleus 19.79 16.92
Solyc04g078760.2.1 Tomato nucleus 19.08 15.98
Solyc08g077460.2.1 Tomato nucleus 18.37 14.94
Solyc03g112860.2.1 Tomato nucleus, plastid 16.96 14.86
Solyc05g005210.2.1 Tomato nucleus 16.61 14.07
Solyc06g061020.2.1 Tomato nucleus 16.25 13.9
Protein Annotations
EnsemblPlants:Solyc02g069180.2.1EnsemblPlantsGene:Solyc02g069180.2PANTHER:PTHR42647PANTHER:PTHR42647:SF12SEG:segUniParc:UPI0002767EE3
UniProt:K4B7Q0MapMan:35.1::::
Description
No Description!
Coordinates
chr2:+:39135864..39138301
Molecular Weight (calculated)
31483.1 Da
IEP (calculated)
5.217
GRAVY (calculated)
-0.525
Length
283 amino acids
Sequence
(BLAST)
001: MAVEARHLNL FTQQQQQMVS NQGNGFSYNT QIVGSSLLPL PTPENSFLPF HQSLMCDSVQ PKTSVNTDSG LTFNLPTTVN ATTAAGVAAT RKRSRDSFNQ
101: FNTCNTTSFV GDDVLPLLQQ YQCDIDRIIS LHTKKVRMEL EERQKQQARV LVAAIGEGVS KKLKEKDEQI QRMGKINMVL QEKVKSLFVE NQLWRDLAQT
201: NEATANSLRN NLEQVLAHVG DERISAGGNF AGTAVEEVAE SCCGSSDHGA GAEEEDEIEG RRTIVGEAQD NRMCKRQEMW SLW
Best Arabidopsis Sequence Match ( AT3G12920.1 )
(BLAST)
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.