Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 2
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400026783 | Potato | cytosol, mitochondrion, nucleus, plastid, vacuole | 94.35 | 82.66 |
Solyc02g031710.2.1 | Tomato | nucleus | 61.84 | 56.45 |
VIT_10s0042g01070.t01 | Wine grape | nucleus | 47.35 | 44.22 |
KRH36722 | Soybean | nucleus | 44.88 | 40.97 |
KRH11729 | Soybean | nucleus | 44.88 | 40.58 |
KRH50476 | Soybean | cytosol, nucleus, plastid | 43.11 | 38.12 |
KRG89416 | Soybean | nucleus | 42.05 | 37.9 |
GSMUA_Achr2P13160_001 | Banana | plastid | 31.8 | 36.44 |
AT5G45100.1 | Thale cress | cytosol | 36.75 | 35.37 |
GSMUA_Achr7P00850_001 | Banana | plastid | 28.62 | 35.22 |
CDY09318 | Canola | cytosol | 28.62 | 34.62 |
CDX94520 | Canola | cytosol | 28.62 | 34.62 |
CDY21311 | Canola | cytosol | 28.62 | 34.62 |
CDY07541 | Canola | cytosol | 28.62 | 34.62 |
GSMUA_Achr4P32070_001 | Banana | nucleus | 34.63 | 34.27 |
Bra039533.1-P | Field mustard | cytosol, nucleus, plastid | 35.69 | 34.12 |
CDY26402 | Canola | cytosol | 35.69 | 34.12 |
Bra013423.1-P | Field mustard | nucleus | 33.92 | 32.43 |
AT4G19700.1 | Thale cress | cytosol | 34.63 | 32.24 |
GSMUA_Achr6P31690_001 | Banana | nucleus | 33.92 | 32.21 |
GSMUA_Achr5P02100_001 | Banana | plastid | 27.56 | 31.97 |
CDY51918 | Canola | cytosol | 31.8 | 31.36 |
GSMUA_Achr4P28300_001 | Banana | nucleus | 26.5 | 31.12 |
CDY71607 | Canola | cytosol | 32.86 | 30.39 |
Bra012532.1-P | Field mustard | nucleus | 32.86 | 30.39 |
CDY01615 | Canola | cytosol | 32.51 | 30.16 |
Bra028364.1-P | Field mustard | cytosol, nucleus, plastid | 30.04 | 30.14 |
Bra027588.1-P | Field mustard | cytosol, nucleus, plastid | 29.68 | 30.11 |
CDY71192 | Canola | cytosol | 29.68 | 30.0 |
CDY18062 | Canola | cytosol | 29.68 | 29.79 |
CDY13070 | Canola | cytosol | 29.33 | 29.75 |
GSMUA_Achr9P09830_001 | Banana | nucleus | 32.86 | 28.97 |
GSMUA_Achr4P23050_001 | Banana | nucleus | 19.08 | 28.72 |
CDY46345 | Canola | cytosol | 28.62 | 28.72 |
Zm00001d033419_P001 | Maize | plastid | 25.09 | 25.36 |
TraesCS7D01G431300.1 | Wheat | mitochondrion | 27.56 | 24.92 |
TraesCS3A01G448500.1 | Wheat | mitochondrion | 25.8 | 24.91 |
TraesCS3D01G441300.1 | Wheat | mitochondrion | 24.73 | 24.14 |
TraesCS7B01G340600.1 | Wheat | mitochondrion | 26.5 | 24.04 |
HORVU7Hr1G100540.2 | Barley | mitochondrion | 25.8 | 24.01 |
EER91098 | Sorghum | nucleus | 30.04 | 23.94 |
TraesCS3D01G441000.1 | Wheat | mitochondrion | 24.38 | 23.79 |
TraesCS7B01G340700.1 | Wheat | mitochondrion | 26.15 | 23.72 |
TraesCS3B01G484600.1 | Wheat | cytosol | 22.97 | 23.64 |
TraesCS7A01G442100.1 | Wheat | mitochondrion | 25.8 | 23.25 |
TraesCS4B01G019600.1 | Wheat | mitochondrion | 25.44 | 23.23 |
TraesCS7B01G340500.1 | Wheat | mitochondrion | 25.8 | 23.17 |
HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 25.09 | 23.13 |
HORVU4Hr1G003180.3 | Barley | mitochondrion | 25.09 | 23.13 |
TraesCS7A01G442300.1 | Wheat | mitochondrion | 25.8 | 23.03 |
TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 19.43 | 23.01 |
TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 24.38 | 22.77 |
TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 25.09 | 22.61 |
HORVU6Hr1G021880.1 | Barley | plastid | 20.85 | 22.61 |
HORVU6Hr1G021960.1 | Barley | plastid | 20.85 | 22.61 |
Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 26.15 | 22.42 |
TraesCS7A01G441900.1 | Wheat | mitochondrion | 24.73 | 22.15 |
TraesCS4A01G293700.1 | Wheat | mitochondrion | 24.03 | 22.08 |
TraesCS7D01G431200.1 | Wheat | mitochondrion | 24.03 | 22.08 |
TraesCS6D01G110700.1 | Wheat | nucleus | 19.79 | 21.29 |
TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 20.14 | 21.03 |
Solyc01g111610.2.1 | Tomato | cytosol | 18.02 | 20.99 |
TraesCS6B01G149100.1 | Wheat | nucleus | 18.73 | 20.15 |
TraesCS6A01G120700.1 | Wheat | nucleus | 18.73 | 20.15 |
Solyc10g055560.1.1 | Tomato | nucleus | 16.96 | 17.78 |
Solyc08g007120.2.1 | Tomato | nucleus | 19.79 | 16.92 |
Solyc04g078760.2.1 | Tomato | nucleus | 19.08 | 15.98 |
Solyc08g077460.2.1 | Tomato | nucleus | 18.37 | 14.94 |
Solyc03g112860.2.1 | Tomato | nucleus, plastid | 16.96 | 14.86 |
Solyc05g005210.2.1 | Tomato | nucleus | 16.61 | 14.07 |
Solyc06g061020.2.1 | Tomato | nucleus | 16.25 | 13.9 |
Protein Annotations
EnsemblPlants:Solyc02g069180.2.1 | EnsemblPlantsGene:Solyc02g069180.2 | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF12 | SEG:seg | UniParc:UPI0002767EE3 |
UniProt:K4B7Q0 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:39135864..39138301
Molecular Weight (calculated)
31483.1 Da
IEP (calculated)
5.217
GRAVY (calculated)
-0.525
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEARHLNL FTQQQQQMVS NQGNGFSYNT QIVGSSLLPL PTPENSFLPF HQSLMCDSVQ PKTSVNTDSG LTFNLPTTVN ATTAAGVAAT RKRSRDSFNQ
101: FNTCNTTSFV GDDVLPLLQQ YQCDIDRIIS LHTKKVRMEL EERQKQQARV LVAAIGEGVS KKLKEKDEQI QRMGKINMVL QEKVKSLFVE NQLWRDLAQT
201: NEATANSLRN NLEQVLAHVG DERISAGGNF AGTAVEEVAE SCCGSSDHGA GAEEEDEIEG RRTIVGEAQD NRMCKRQEMW SLW
101: FNTCNTTSFV GDDVLPLLQQ YQCDIDRIIS LHTKKVRMEL EERQKQQARV LVAAIGEGVS KKLKEKDEQI QRMGKINMVL QEKVKSLFVE NQLWRDLAQT
201: NEATANSLRN NLEQVLAHVG DERISAGGNF AGTAVEEVAE SCCGSSDHGA GAEEEDEIEG RRTIVGEAQD NRMCKRQEMW SLW
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.