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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P11160_001
GSMUA_Achr1P23560_001
GSMUA_Achr3P00510_001
GSMUA_Achr3P05670_001
GSMUA_Achr3P27880_001
GSMUA_Achr4P17120_001
GSMUA_Achr4P20600_001
GSMUA_Achr4P22890_001
GSMUA_Achr5P04870_001
GSMUA_Achr5P14780_001
GSMUA_Achr5P21910_001
GSMUA_Achr6P03810_001
GSMUA_Achr7P01240_001
GSMUA_Achr7P15930_001
GSMUA_Achr7P24090_001
GSMUA_Achr8P09080_001
GSMUA_Achr9P22950_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G19700.1 GSMUA_Achr10P... AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr1P23560_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr3P00510_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr3P05670_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr3P27880_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr4P20600_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr5P04870_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr5P21910_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr6P03810_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr7P15930_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr9P22950_001 AT2G24570.1 21798944
AT4G19700.1 GSMUA_Achr10P... AT2G33210.1 21798944
AT4G19700.1 GSMUA_Achr10P... AT2G33210.1 21798944
AT4G19700.1 GSMUA_Achr1P11160_001 AT2G33210.1 21798944
AT4G19700.1 GSMUA_Achr8P09080_001 AT2G43370.1 21798944
AT4G19700.1 GSMUA_Achr7P24090_001 AT3G13860.1 21798944
AT4G19700.1 GSMUA_Achr4P17120_001 AT4G02770.1 21798944
AT4G19700.1 GSMUA_Achr5P14780_001 AT4G02770.1 21798944
AT4G19700.1 GSMUA_Achr10P... AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr1P23560_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr3P00510_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr3P05670_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr3P27880_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr4P20600_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr5P04870_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr5P21910_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr6P03810_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr7P15930_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr9P22950_001 AT4G31550.1 21798944
AT4G19700.1 GSMUA_Achr11P... AT5G08330.1 21798944
AT4G19700.1 GSMUA_Achr4P22890_001 AT5G38640.1 21798944
AT4G19700.1 GSMUA_Achr7P01240_001 AT5G38640.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P13160_001 Banana plastid 58.92 57.49
GSMUA_Achr7P00850_001 Banana plastid 54.36 56.96
GSMUA_Achr5P02100_001 Banana plastid 54.36 53.69
GSMUA_Achr4P32070_001 Banana nucleus 63.49 53.5
GSMUA_Achr4P23050_001 Banana nucleus 41.49 53.19
GSMUA_Achr6P31690_001 Banana nucleus 56.85 45.97
GSMUA_Achr9P09830_001 Banana nucleus 53.53 40.19
KRH43767 Soybean nucleus 39.0 37.15
VIT_19s0027g00740.t01 Wine grape nucleus 44.81 34.95
CDY21311 Canola cytosol 33.61 34.62
CDX94520 Canola cytosol 33.61 34.62
CDY09318 Canola cytosol 33.61 34.62
CDY07541 Canola cytosol 33.61 34.62
CDX88507 Canola nucleus 41.08 33.22
TraesCS3A01G448500.1 Wheat mitochondrion 40.25 33.11
TraesCS3D01G441000.1 Wheat mitochondrion 39.83 33.1
TraesCS3D01G441300.1 Wheat mitochondrion 39.83 33.1
TraesCS3B01G484600.1 Wheat cytosol 37.76 33.09
TraesCS6A01G079900.1 Wheat cytosol, mitochondrion, plastid 32.78 33.05
HORVU4Hr1G003180.3 Barley mitochondrion 41.91 32.9
TraesCS7D01G431300.1 Wheat mitochondrion 42.32 32.59
PGSC0003DMT400026783 Potato cytosol, mitochondrion, nucleus, plastid, vacuole 43.15 32.2
TraesCS4D01G018100.1 Wheat mitochondrion, nucleus 40.25 32.01
KRH50476 Soybean cytosol, nucleus, plastid 42.32 31.88
VIT_10s0042g01070.t01 Wine grape nucleus 39.83 31.68
HORVU7Hr1G100520.1 Barley cytosol, mitochondrion 40.25 31.6
Zm00001d013571_P001 Maize cytosol, nucleus, plastid 43.15 31.52
TraesCS7B01G340500.1 Wheat mitochondrion 41.08 31.43
Bra039533.1-P Field mustard cytosol, nucleus, plastid 38.59 31.42
CDY26402 Canola cytosol 38.59 31.42
PGSC0003DMT400062617 Potato nucleus 39.0 31.33
Bra035092.1-P Field mustard nucleus 41.08 31.33
CDX87407 Canola nucleus 41.08 31.33
TraesCS7A01G442300.1 Wheat mitochondrion 41.08 31.23
KRG89416 Soybean nucleus 40.66 31.21
TraesCS7B01G340700.1 Wheat mitochondrion 40.25 31.09
EER91098 Sorghum nucleus 45.64 30.99
TraesCS7D01G431200.1 Wheat mitochondrion 39.42 30.84
TraesCS4B01G019600.1 Wheat mitochondrion 39.42 30.65
AT5G45100.1 Thale cress cytosol 37.34 30.61
TraesCS7A01G442100.1 Wheat mitochondrion 39.83 30.57
HORVU6Hr1G021960.1 Barley plastid 32.78 30.27
HORVU6Hr1G021880.1 Barley plastid 32.78 30.27
HORVU7Hr1G100540.2 Barley mitochondrion 38.17 30.26
CDX79294 Canola nucleus 38.17 30.26
TraesCS7D01G431100.1 Wheat mitochondrion, nucleus 39.42 30.25
TraesCS7B01G340600.1 Wheat mitochondrion 39.0 30.13
TraesCS7A01G441900.1 Wheat mitochondrion 39.42 30.06
CDY71192 Canola cytosol 34.85 30.0
Solyc02g031710.2.1 Tomato nucleus 38.59 30.0
TraesCS4A01G293700.1 Wheat mitochondrion 38.17 29.87
TraesCS6A01G120700.1 Wheat nucleus 32.37 29.66
CDY13070 Canola cytosol 33.61 29.03
Bra027588.1-P Field mustard cytosol, nucleus, plastid 33.61 29.03
KRH13682 Soybean nucleus 40.25 28.78
GSMUA_Achr2P12040_001 Banana plastid 31.95 28.62
TraesCS6D01G110700.1 Wheat nucleus 31.12 28.52
TraesCS6B01G149100.1 Wheat nucleus 31.12 28.52
TraesCS6D01G073600.1 Wheat cytosol, nucleus, plastid 31.95 28.41
KRH36722 Soybean nucleus 36.51 28.39
Bra028364.1-P Field mustard cytosol, nucleus, plastid 33.2 28.37
CDY18062 Canola cytosol 33.2 28.37
KRH11729 Soybean nucleus 36.51 28.11
Bra039354.1-P Field mustard cytosol 37.76 28.0
CDY43390 Canola cytosol 37.76 28.0
CDY51918 Canola cytosol 33.2 27.87
CDY46345 Canola cytosol 32.37 27.66
AT1G79110.1 Thale cress nucleus 41.08 27.65
CDY24237 Canola nucleus 36.93 27.47
AT3G12920.1 Thale cress nucleus 38.17 27.46
Bra012532.1-P Field mustard nucleus 34.85 27.45
CDY71607 Canola cytosol 34.85 27.45
Bra013423.1-P Field mustard nucleus 33.61 27.36
AT4G19700.1 Thale cress cytosol 34.44 27.3
Bra034718.1-P Field mustard nucleus 38.17 27.3
CDY01615 Canola cytosol 34.44 27.21
Bra001477.1-P Field mustard nucleus 38.17 27.06
CDX82568 Canola nucleus 37.76 26.76
CDY64561 Canola nucleus 37.76 26.76
Solyc02g069180.2.1 Tomato plastid 31.12 26.5
Zm00001d033419_P001 Maize plastid 29.46 25.36
GSMUA_Achr6P11810_001 Banana nucleus 31.95 25.33
GSMUA_Achr2P21330_001 Banana nucleus 29.88 25.09
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus, plastid 29.46 24.65
GSMUA_Achr1P00560_001 Banana nucleus 28.63 23.88
GSMUA_Achr4P30100_001 Banana plastid 28.63 22.62
GSMUA_Achr2P18250_001 Banana nucleus 30.71 22.42
GSMUA_Achr4P21690_001 Banana nucleus 29.88 22.22
GSMUA_Achr10P... Banana nucleus 29.05 22.01
GSMUA_Achr11P... Banana nucleus 29.05 21.94
GSMUA_Achr8P14860_001 Banana nucleus 29.05 20.77
CDY23552 Canola cytosol 17.84 19.82
GSMUA_Achr6P08300_001 Banana plastid 28.22 19.65
GSMUA_Achr6P16260_001 Banana nucleus 26.56 18.99
GSMUA_Achr10P... Banana nucleus 24.48 18.55
GSMUA_Achr6P10180_001 Banana plastid 23.24 16.14
GSMUA_Achr11P... Banana nucleus 22.82 14.71
Protein Annotations
EnsemblPlants:GSMUA_Achr4P28300_001EnsemblPlants:GSMUA_Achr4T28300_001EnsemblPlantsGene:GSMUA_Achr4G28300_001Gene3D:3.30.40.10InterPro:E3ligase_BOI_likeInterPro:IPR001841
InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDncoils:CoilPANTHER:PTHR42647PANTHER:PTHR42647:SF12
PFAM:PF13920PFscan:PS50089PIRSF:PIRSF036836SEG:segUniParc:UPI000295E1DBUniProt:M0SSU2
MapMan:35.1:::::
Description
Putative Protein binding protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G28300_001]
Coordinates
chr4:+:26742881..26744561
Molecular Weight (calculated)
26304.4 Da
IEP (calculated)
7.820
GRAVY (calculated)
-0.326
Length
241 amino acids
Sequence
(BLAST)
001: MCSEIIGSEA DQPGTYGLQE GVVAPVADAA VAAAASRKRP RPPSFLGGDG LCYVQQQMRD FDRLVLQHAE SVRAELAVRR HGFARRVVAA LEEGVLARLK
101: AKEEEIARVG ERNWALEERI RRLRVENQVW RDLAQRSEAT ANVLRAKLEH ALAAAQVRTE EEATAENAEF CRSGTNEEGE AAVGRGWGTA CRSCRERKPS
201: VLLLPCRHLC LCAACGPVVD TCPVCGCTKN GSVQVNMSRH S
Best Arabidopsis Sequence Match ( AT5G45100.1 )
(BLAST)
001: MAVEARHMNL FSSQYITNRE CVKSQTNMNN GQQIAGGGFP VTIGDRNLQY IDPINSFNKS ESELTAISKR QRDSTFDSDA LIASQKRRAI AFSPASLIDA
101: ELVSQIQQQN SEIDRFVAQQ TETLRIELEA RQRTQTRMLA SAVQNAILKK LKAKDEEIIR MGKLNWVLQE RVKNLYVENQ IWRDLAQTNE ATANNLRSNL
201: EQVLAQVDDL DAFRRPLVEE ADDAESSCGS CDGGDVTAVV NGGCKRCGEL TASVLVLPCR HLCLCTVCGS SALLRTCPVC DMVMTASVHV NMSS
Arabidopsis Description
BRG1BOI-related E3 ubiquitin-protein ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHE4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.