Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P16260_001 | Banana | nucleus | 66.98 | 63.2 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, nucleus, plastid | 49.37 | 54.51 |
| GSMUA_Achr2P21330_001 | Banana | nucleus | 48.74 | 54.01 |
| GSMUA_Achr6P11810_001 | Banana | nucleus | 49.37 | 51.64 |
| GSMUA_Achr11P... | Banana | nucleus | 48.11 | 47.96 |
| GSMUA_Achr6P08300_001 | Banana | plastid | 51.57 | 47.4 |
| Zm00001d010503_P001 | Maize | cytosol, mitochondrion | 16.04 | 39.53 |
| Zm00001d052640_P001 | Maize | cytosol, extracellular, nucleus | 34.59 | 37.16 |
| Zm00001d026161_P001 | Maize | cytosol | 16.35 | 36.88 |
| TraesCS2A01G290000.1 | Wheat | cytosol | 37.42 | 36.73 |
| TraesCS2D01G287900.1 | Wheat | cytosol | 36.79 | 36.56 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 21.38 | 36.17 |
| TraesCS2B01G306500.1 | Wheat | cytosol | 36.16 | 35.49 |
| OQU83596 | Sorghum | cytosol, extracellular | 33.96 | 34.95 |
| EES12084 | Sorghum | cytosol, nucleus, plastid | 32.08 | 34.81 |
| Zm00001d004743_P001 | Maize | plastid | 17.92 | 34.55 |
| TraesCS2D01G288000.1 | Wheat | cytosol | 34.59 | 34.06 |
| TraesCS2A01G290100.1 | Wheat | cytosol | 34.59 | 34.06 |
| Zm00001d025319_P001 | Maize | cytosol | 33.02 | 33.98 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 24.53 | 33.91 |
| Os04t0402500-00 | Rice | cytosol | 33.33 | 33.54 |
| Zm00001d025310_P001 | Maize | cytosol | 33.65 | 33.33 |
| Os04t0403200-01 | Rice | nucleus | 36.16 | 33.14 |
| TraesCS2B01G306600.1 | Wheat | cytosol | 33.65 | 33.13 |
| Zm00001d003850_P001 | Maize | extracellular | 34.59 | 32.93 |
| Zm00001d003852_P001 | Maize | cytosol, nucleus, plastid | 33.96 | 32.73 |
| EES10713 | Sorghum | cytosol | 35.53 | 32.47 |
| OQU83597 | Sorghum | cytosol | 34.59 | 32.45 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 25.16 | 32.39 |
| OQU81469 | Sorghum | cytosol | 34.28 | 32.34 |
| Zm00001d052639_P001 | Maize | extracellular | 33.33 | 31.36 |
| Zm00001d016648_P001 | Maize | cytosol | 30.19 | 30.97 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 23.58 | 30.74 |
| EES05161 | Sorghum | plastid | 32.7 | 30.68 |
| Os11t0542100-01 | Rice | cytosol | 31.45 | 30.58 |
| OQU85032 | Sorghum | cytosol | 35.53 | 30.29 |
| OQU81471 | Sorghum | mitochondrion | 34.59 | 29.1 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 22.01 | 29.05 |
| GSMUA_Achr2P12040_001 | Banana | plastid | 24.53 | 29.0 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 25.47 | 28.32 |
| GSMUA_Achr10P... | Banana | nucleus | 27.99 | 27.99 |
| GSMUA_Achr1P00560_001 | Banana | nucleus | 24.84 | 27.34 |
| GSMUA_Achr4P21690_001 | Banana | nucleus | 26.42 | 25.93 |
| GSMUA_Achr6P10180_001 | Banana | plastid | 27.99 | 25.65 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 22.96 | 24.5 |
| GSMUA_Achr2P18250_001 | Banana | nucleus | 25.16 | 24.24 |
| GSMUA_Achr4P30100_001 | Banana | plastid | 22.96 | 23.93 |
| GSMUA_Achr11P... | Banana | nucleus | 27.99 | 23.8 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 23.58 | 23.36 |
| GSMUA_Achr8P14860_001 | Banana | nucleus | 23.27 | 21.96 |
| Os02t0246101-00 | Rice | cytosol | 10.38 | 19.08 |
| Os11t0543100-01 | Rice | cytosol | 11.01 | 17.59 |
| Zm00001d003613_P002 | Maize | nucleus | 21.38 | 15.67 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P12350_001 | EnsemblPlants:GSMUA_Achr10T12350_001 | EnsemblPlantsGene:GSMUA_Achr10G12350_001 | Gene3D:1.10.1170.10 | Gene3D:1.10.533.10 | ncoils:Coil |
| PANTHER:PTHR42647 | PANTHER:PTHR42647:SF3 | SEG:seg | UniParc:UPI000295F3A6 | UniProt:M0RHL1 | MapMan:35.1 |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G12350_001]
Coordinates
chr10:+:21394488..21395549
Molecular Weight (calculated)
35033.6 Da
IEP (calculated)
6.413
GRAVY (calculated)
-0.354
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLQMLLEH HDMLGRYSTH LGGVNNATVF SDPQSELTCF ASGTRKRARE EPPAVVLQSN LESVLPPFCY PNLATVTAVP ERAVAAALSA PGCHQTRLLD
101: SGGTSTSGRP ASPLTQDLVS HLSYQNAEID ELIRLQRERL RSGLEEVRNR HCKALLWCVE QRVAKRLREK EAELEKARRL NAELEETVRQ LTAETELWFG
201: VAKNNESVAA SLRANLEQVL LHNAATAQVK EGYGDTDDDA QSCRSAVADR RHASSPATEA EEVRRRPWAA CRSCGERDVC VLLLPCRHLC LCKICESMID
301: ACPACGSAKN ACLQIAMS
101: SGGTSTSGRP ASPLTQDLVS HLSYQNAEID ELIRLQRERL RSGLEEVRNR HCKALLWCVE QRVAKRLREK EAELEKARRL NAELEETVRQ LTAETELWFG
201: VAKNNESVAA SLRANLEQVL LHNAATAQVK EGYGDTDDDA QSCRSAVADR RHASSPATEA EEVRRRPWAA CRSCGERDVC VLLLPCRHLC LCKICESMID
301: ACPACGSAKN ACLQIAMS
001: MLGGNNDNPV PQVLMNDSQF RYQSNTSLNQ LHLLGTMRAG CTIDPVNYFA NDNLAPMMRL NSTRGRETEN NNIMQRQQKL QISLNYNYNN NNTVVQDEVP
101: KQNLVSTGLR LSYDDDERNS SVTSANGSIT TPVYQSLGDN IRLDLNRQND ELDQFIKFRA DQMAKGVRDI KQRHVTSFVT ALEKDVSKKL QEKDHEIESM
201: NKKNRELVDK IKQVAVEAQN WHYKAKYNES VVNALKVNLQ QVMSHGNDNN AVGGGVADHH QMKEGFGDSE IDDEAASYNY LNIPGMPSTG MRCKLCNVKN
301: VSVLLVPCRH LSLCKDCDVF TGVCPVCQSL KTSSVQVFFF
101: KQNLVSTGLR LSYDDDERNS SVTSANGSIT TPVYQSLGDN IRLDLNRQND ELDQFIKFRA DQMAKGVRDI KQRHVTSFVT ALEKDVSKKL QEKDHEIESM
201: NKKNRELVDK IKQVAVEAQN WHYKAKYNES VVNALKVNLQ QVMSHGNDNN AVGGGVADHH QMKEGFGDSE IDDEAASYNY LNIPGMPSTG MRCKLCNVKN
301: VSVLLVPCRH LSLCKDCDVF TGVCPVCQSL KTSSVQVFFF
Arabidopsis Description
At1g60610 [Source:UniProtKB/TrEMBL;Acc:Q4TU35]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.