Factsheet for Zm00001d010503_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004743_P001	Maize	plastid	93.8	73.33
Zm00001d026161_P001	Maize	cytosol	77.52	70.92
Zm00001d025319_P001	Maize	cytosol	79.84	33.33
Zm00001d003613_P002	Maize	nucleus	94.57	28.11
Zm00001d003850_P001	Maize	extracellular	69.77	26.95
Os04t0403200-01	Rice	nucleus	65.12	24.21
Zm00001d025310_P001	Maize	cytosol	55.04	22.12
Zm00001d003852_P001	Maize	cytosol, nucleus, plastid	55.81	21.82
Zm00001d016648_P001	Maize	cytosol	51.16	21.29
Zm00001d052640_P001	Maize	cytosol, extracellular, nucleus	44.96	19.59
Zm00001d033419_P001	Maize	plastid	38.76	17.86
Zm00001d052639_P001	Maize	extracellular	44.19	16.86
GSMUA_Achr10P...	Banana	nucleus	39.53	16.04
GSMUA_Achr6P16260_001	Banana	nucleus	38.76	14.84
Zm00001d013571_P001	Maize	cytosol, nucleus, plastid	36.43	14.24
Zm00001d029988_P001	Maize	cytosol, mitochondrion, nucleus	34.88	13.39
Zm00001d051484_P001	Maize	nucleus, plastid	35.66	13.03
GSMUA_Achr6P08300_001	Banana	plastid	34.88	13.01
Zm00001d047069_P001	Maize	cytosol	33.33	12.95
Zm00001d017649_P001	Maize	plastid	32.56	12.69
Zm00001d015130_P001	Maize	cytosol, nucleus, plastid	27.13	9.83
Zm00001d047856_P001	Maize	nucleus, plastid	23.26	9.12
Zm00001d028532_P001	Maize	nucleus, plastid	23.26	8.9
Os11t0543100-01	Rice	cytosol	1.55	1.01

Protein Annotations

EnsemblPlants:Zm00001d010503_P001	EnsemblPlants:Zm00001d010503_T001	EnsemblPlantsGene:Zm00001d010503	GO:GO:0003674	GO:GO:0003824	GO:GO:0016874
ncoils:Coil	PANTHER:PTHR42647	PANTHER:PTHR42647:SF2	ProteinID:AQK94199.1	SEG:seg	UniParc:UPI0008439F31
UniProt:A0A1D6FRI6	MapMan:35.2	:	:	:	:

Description

Probable BOI-related E3 ubiquitin-protein ligase 2

Coordinates

chr8:-:118248244..118248633

Molecular Weight (calculated)

13348.9 Da

IEP (calculated)

8.346

GRAVY (calculated)

-0.064

Length

129 amino acids

Sequence
(BLAST)

001: MRAALQEARR RHARGVVAAV GRAAEARLRA AEAELERARR RGADLEERLR QLAGEGQAWL GVARSHEAVA AGLRATLDKV LQQPAVAAAG GGECGVAEDA
101: QSCCFVASPS GLVAGDSLLY ALSLSSPSC

Best Arabidopsis Sequence Match ( AT3G12920.1 )
(BLAST)

001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS

Arabidopsis Description

BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.