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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025310_P001 Maize cytosol 74.85 76.95
Os04t0402500-00 Rice cytosol 53.64 56.01
Zm00001d010503_P001 Maize cytosol, mitochondrion 21.82 55.81
Zm00001d025319_P001 Maize cytosol 49.39 52.75
Zm00001d003850_P001 Maize extracellular 53.03 52.4
Zm00001d004743_P001 Maize plastid 25.76 51.52
TraesCS2A01G290100.1 Wheat cytosol 48.48 49.54
TraesCS2D01G288000.1 Wheat cytosol 48.18 49.23
Zm00001d016648_P001 Maize cytosol 45.76 48.71
TraesCS2B01G306600.1 Wheat cytosol 46.97 47.99
Zm00001d026161_P001 Maize cytosol 19.39 45.39
Zm00001d052640_P001 Maize cytosol, extracellular, nucleus 36.06 40.2
Zm00001d052639_P001 Maize extracellular 38.18 37.28
GSMUA_Achr10P... Banana nucleus 32.73 33.96
GSMUA_Achr6P16260_001 Banana nucleus 32.12 31.45
GSMUA_Achr6P08300_001 Banana plastid 31.82 30.35
Zm00001d047069_P001 Maize cytosol 27.58 27.41
Zm00001d029988_P001 Maize cytosol, mitochondrion, nucleus 26.97 26.49
Zm00001d013571_P001 Maize cytosol, nucleus, plastid 25.76 25.76
Zm00001d051484_P001 Maize nucleus, plastid 27.27 25.5
Zm00001d033419_P001 Maize plastid 20.3 23.93
Zm00001d017649_P001 Maize plastid 23.94 23.87
Zm00001d003613_P002 Maize nucleus 29.09 22.12
Zm00001d015130_P001 Maize cytosol, nucleus, plastid 23.03 21.35
Zm00001d047856_P001 Maize nucleus, plastid 20.91 20.97
Zm00001d028532_P001 Maize nucleus, plastid 20.61 20.18
Protein Annotations
EnsemblPlants:Zm00001d003852_P001EnsemblPlants:Zm00001d003852_T001EnsemblPlantsGene:Zm00001d003852Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDncoils:CoilPANTHER:PTHR42647PANTHER:PTHR42647:SF2PFAM:PF13920
PFscan:PS50089ProteinID:ONM17831.1SEG:segUniParc:UPI0002219FB6UniProt:A0A1D6EBX8MapMan:35.2
Description
Inhibitor of apoptosis-like protein
Coordinates
chr2:+:62770637..62772650
Molecular Weight (calculated)
34169.5 Da
IEP (calculated)
7.947
GRAVY (calculated)
-0.113
Length
330 amino acids
Sequence
(BLAST)
001: MAVQGRHLSH DLAAQAAGGY LFLDEYAGCA PAAAPAPARI GDATTALSDF PRVEVAWCNY DGFLPRKRPR LETAAPAAGG GLSEDQRAGL PPAGTERLLP
101: LPVAVAPFVN ARSRRAVAAS GTASTSGRVA SGATVAASRG LLSSWTHRHG VEIDALVRLE AERMRAALEE ARRRHARALL AAVGRAASGR LRASETDLER
201: ALRRGAELEE KARQAGAECQ AWMAVARRHE AAAAGLRATL DQLLQSPYGA GGGREEGGEA EDAESCCFED GGASCASRSK LACRSCGAGE ASVLLLPCRH
301: LCLCRACEAG VDACPVCAAA KNGSLHVLVS
Best Arabidopsis Sequence Match ( AT3G12920.1 )
(BLAST)
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.