Factsheet for Zm00001d004743_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010503_P001	Maize	cytosol, mitochondrion	73.33	93.8
Zm00001d026161_P001	Maize	cytosol	59.39	69.5
Zm00001d025319_P001	Maize	cytosol	75.15	40.13
Zm00001d003613_P002	Maize	nucleus	87.88	33.41
Zm00001d003850_P001	Maize	extracellular	65.45	32.34
Os04t0403200-01	Rice	nucleus	61.82	29.39
Zm00001d016648_P001	Maize	cytosol	48.48	25.81
Zm00001d003852_P001	Maize	cytosol, nucleus, plastid	51.52	25.76
Zm00001d025310_P001	Maize	cytosol	49.7	25.55
Zm00001d052640_P001	Maize	cytosol, extracellular, nucleus	40.0	22.3
Zm00001d033419_P001	Maize	plastid	35.15	20.71
Zm00001d052639_P001	Maize	extracellular	41.82	20.41
GSMUA_Achr10P...	Banana	nucleus	34.55	17.92
GSMUA_Achr6P16260_001	Banana	nucleus	36.36	17.8
Zm00001d013571_P001	Maize	cytosol, nucleus, plastid	35.15	17.58
GSMUA_Achr6P08300_001	Banana	plastid	32.73	15.61
Zm00001d029988_P001	Maize	cytosol, mitochondrion, nucleus	31.52	15.48
Zm00001d051484_P001	Maize	nucleus, plastid	31.52	14.73
Zm00001d017649_P001	Maize	plastid	29.09	14.5
Zm00001d047069_P001	Maize	cytosol	29.09	14.46
Zm00001d015130_P001	Maize	cytosol, nucleus, plastid	24.24	11.24
Zm00001d047856_P001	Maize	nucleus, plastid	19.39	9.73
Zm00001d028532_P001	Maize	nucleus, plastid	19.39	9.5
Os11t0543100-01	Rice	cytosol	8.48	7.04

Protein Annotations

EnsemblPlants:Zm00001d004743_P001	EnsemblPlants:Zm00001d004743_T001	EnsemblPlantsGene:Zm00001d004743	GO:GO:0003674	GO:GO:0003824	GO:GO:0016874
InterPro:E3ligase_BOI_like	ncoils:Coil	PANTHER:PTHR42647	PANTHER:PTHR42647:SF2	PIRSF:PIRSF036836	ProteinID:ONM19520.1
SEG:seg	UniParc:UPI0008459729	UniProt:A0A1D6EHB8	MapMan:35.2	:	:

Description

Probable BOI-related E3 ubiquitin-protein ligase 2

Coordinates

chr2:-:135500270..135500853

Molecular Weight (calculated)

17544.9 Da

IEP (calculated)

8.517

GRAVY (calculated)

-0.259

Length

165 amino acids

Sequence
(BLAST)

001: MASGVLSQLY HQGVEVDALV RVETDRMRAT LQEARRRHAR GVVAAVGRAA EARLRAAEAE LERARRRGAD LEERLRQLAG EGQAWLGVAR SHEAVAAGLR
101: ATLDKVLQQP AGGGECGVAE DAQSCCFVAS PSGLVAGDSL LYALSLSPPQ AAERHSQTTP RLLRG

Best Arabidopsis Sequence Match ( AT3G12920.1 )
(BLAST)

001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS

Arabidopsis Description

BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.