Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91098 | Sorghum | nucleus | 76.67 | 71.27 |
| Zm00001d033419_P001 | Maize | plastid | 48.18 | 56.79 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 42.42 | 50.91 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 43.64 | 49.66 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 43.64 | 49.66 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 43.64 | 49.15 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 44.55 | 47.88 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 43.33 | 47.19 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 43.94 | 47.08 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 32.42 | 46.52 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 43.03 | 46.25 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 43.33 | 46.13 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 42.42 | 44.73 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 42.42 | 44.59 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 42.42 | 44.44 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 41.82 | 44.23 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 41.52 | 43.91 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 40.91 | 43.83 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 32.73 | 43.72 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 41.82 | 43.67 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 41.52 | 43.63 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 41.52 | 43.22 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 31.52 | 43.15 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 39.7 | 43.09 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 31.82 | 43.03 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 30.61 | 42.26 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 23.94 | 42.02 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 36.06 | 41.61 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 33.33 | 40.59 |
| HORVU6Hr1G021880.1 | Barley | plastid | 31.21 | 39.46 |
| HORVU6Hr1G021960.1 | Barley | plastid | 31.21 | 39.46 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 34.85 | 38.59 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 36.36 | 37.38 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 29.09 | 36.5 |
| Zm00001d010503_P001 | Maize | cytosol, mitochondrion | 14.24 | 36.43 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 28.79 | 36.12 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 28.48 | 35.74 |
| Zm00001d004743_P001 | Maize | plastid | 17.58 | 35.15 |
| CDY09318 | Canola | cytosol | 24.55 | 34.62 |
| CDY07541 | Canola | cytosol | 24.55 | 34.62 |
| CDY21311 | Canola | cytosol | 24.55 | 34.62 |
| CDX94520 | Canola | cytosol | 24.55 | 34.62 |
| Bra035092.1-P | Field mustard | nucleus | 32.12 | 33.54 |
| CDX87407 | Canola | nucleus | 32.12 | 33.54 |
| KRH43767 | Soybean | nucleus | 25.45 | 33.2 |
| CDX88507 | Canola | nucleus | 29.7 | 32.89 |
| VIT_19s0027g00740.t01 | Wine grape | nucleus | 30.61 | 32.69 |
| AT5G45100.1 | Thale cress | cytosol | 29.09 | 32.65 |
| KRH11729 | Soybean | nucleus | 30.91 | 32.59 |
| KRH50476 | Soybean | cytosol, nucleus, plastid | 31.52 | 32.5 |
| CDY26402 | Canola | cytosol | 28.79 | 32.09 |
| Bra039533.1-P | Field mustard | cytosol, nucleus, plastid | 28.79 | 32.09 |
| KRH36722 | Soybean | nucleus | 30.0 | 31.94 |
| CDY43390 | Canola | cytosol | 31.21 | 31.69 |
| Bra039354.1-P | Field mustard | cytosol | 31.21 | 31.69 |
| KRG89416 | Soybean | nucleus | 29.7 | 31.21 |
| Bra001477.1-P | Field mustard | nucleus | 32.12 | 31.18 |
| CDY24237 | Canola | nucleus | 30.61 | 31.17 |
| CDX82568 | Canola | nucleus | 31.82 | 30.88 |
| CDY01615 | Canola | cytosol | 28.48 | 30.82 |
| PGSC0003DMT400062617 | Potato | nucleus | 27.88 | 30.67 |
| AT4G19700.1 | Thale cress | cytosol | 28.18 | 30.59 |
| CDY64561 | Canola | nucleus | 31.52 | 30.59 |
| AT3G12920.1 | Thale cress | nucleus | 30.91 | 30.45 |
| Bra012532.1-P | Field mustard | nucleus | 28.18 | 30.39 |
| CDY71607 | Canola | cytosol | 28.18 | 30.39 |
| VIT_10s0042g01070.t01 | Wine grape | nucleus | 27.88 | 30.36 |
| Zm00001d025319_P001 | Maize | cytosol | 28.18 | 30.1 |
| Bra013423.1-P | Field mustard | nucleus | 26.97 | 30.07 |
| PGSC0003DMT400026783 | Potato | cytosol, mitochondrion, nucleus, plastid, vacuole | 29.39 | 30.03 |
| KRH13682 | Soybean | nucleus | 30.3 | 29.67 |
| Bra034718.1-P | Field mustard | nucleus | 30.0 | 29.38 |
| CDY71192 | Canola | cytosol | 24.85 | 29.29 |
| CDY51918 | Canola | cytosol | 25.45 | 29.27 |
| Zm00001d003850_P001 | Maize | extracellular | 29.39 | 29.04 |
| CDX79294 | Canola | nucleus | 26.67 | 28.95 |
| AT1G79110.1 | Thale cress | nucleus | 31.21 | 28.77 |
| CDY13070 | Canola | cytosol | 24.24 | 28.67 |
| Bra027588.1-P | Field mustard | cytosol, nucleus, plastid | 24.24 | 28.67 |
| Solyc02g031710.2.1 | Tomato | nucleus | 26.67 | 28.39 |
| Zm00001d016648_P001 | Maize | cytosol | 26.06 | 27.74 |
| CDY46345 | Canola | cytosol | 23.64 | 27.66 |
| CDY18062 | Canola | cytosol | 23.64 | 27.66 |
| Zm00001d026161_P001 | Maize | cytosol | 11.82 | 27.66 |
| Bra028364.1-P | Field mustard | cytosol, nucleus, plastid | 23.64 | 27.66 |
| Solyc02g069180.2.1 | Tomato | plastid | 22.42 | 26.15 |
| Zm00001d052640_P001 | Maize | cytosol, extracellular, nucleus | 23.33 | 26.01 |
| Zm00001d029988_P001 | Maize | cytosol, mitochondrion, nucleus | 26.36 | 25.89 |
| Zm00001d003852_P001 | Maize | cytosol, nucleus, plastid | 25.76 | 25.76 |
| Zm00001d025310_P001 | Maize | cytosol | 24.55 | 25.23 |
| Zm00001d047069_P001 | Maize | cytosol | 24.85 | 24.7 |
| Zm00001d052639_P001 | Maize | extracellular | 24.55 | 23.96 |
| CDY23552 | Canola | cytosol | 14.85 | 22.58 |
| Zm00001d017649_P001 | Maize | plastid | 22.12 | 22.05 |
| Zm00001d051484_P001 | Maize | nucleus, plastid | 23.33 | 21.81 |
| Zm00001d047856_P001 | Maize | nucleus, plastid | 20.3 | 20.36 |
| Zm00001d028532_P001 | Maize | nucleus, plastid | 19.7 | 19.29 |
| Zm00001d015130_P001 | Maize | cytosol, nucleus, plastid | 16.67 | 15.45 |
| Zm00001d003613_P002 | Maize | nucleus | 19.7 | 14.98 |
Protein Annotations
| EnsemblPlants:Zm00001d013571_P001 | EnsemblPlants:Zm00001d013571_T001 | EnsemblPlantsGene:Zm00001d013571 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016874 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil |
| PANTHER:PTHR42647 | PANTHER:PTHR42647:SF12 | PFAM:PF13920 | PFscan:PS50089 | ProteinID:AQK63880.1 | SEG:seg |
| UniParc:UPI000221D835 | UniProt:A0A1D6GKM1 | MapMan:35.1 | : | : | : |
Description
Probable BOI-related E3 ubiquitin-protein ligase 2
Coordinates
chr5:+:14479967..14481511
Molecular Weight (calculated)
34505.7 Da
IEP (calculated)
7.339
GRAVY (calculated)
-0.214
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEAHSLLL AGGHKQLTSA GWPWTTGDEA RCATARPSHQ QAFQLQQASC VGVGVGLPAA APVSSAAAAP PAPMIAQQYA AGGRLFVGDA AESGVTFGGG
101: GAVQQEAPRK RKRAEQGQTP PPVLGTGAAD VAAQFQQQLV DVDRLVLQHT AKMWAGLTEQ RRRHARQVVA TVEAAAAPRL RAKEEEIRRM RRVNWALEER
201: VKSMYVEAHM WRDLAQSNDA AVTALRGELQ QALDAQQTRR RADDADSCCC GENDVFITGA GAAENEEEAG TGTSSSGHVR GACAVCGDNA ADVLLLPCRH
301: LCACAPCAAA ARACPACGCA KNGSVCVNFS
101: GAVQQEAPRK RKRAEQGQTP PPVLGTGAAD VAAQFQQQLV DVDRLVLQHT AKMWAGLTEQ RRRHARQVVA TVEAAAAPRL RAKEEEIRRM RRVNWALEER
201: VKSMYVEAHM WRDLAQSNDA AVTALRGELQ QALDAQQTRR RADDADSCCC GENDVFITGA GAAENEEEAG TGTSSSGHVR GACAVCGDNA ADVLLLPCRH
301: LCACAPCAAA ARACPACGCA KNGSVCVNFS
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.