Factsheet for Zm00001d025319_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010503_P001	Maize	cytosol, mitochondrion	33.33	79.84
Zm00001d004743_P001	Maize	plastid	40.13	75.15
Zm00001d003850_P001	Maize	extracellular	78.32	72.46
Zm00001d026161_P001	Maize	cytosol	32.36	70.92
EES10713	Sorghum	cytosol	79.61	70.69
TraesCS2A01G290000.1	Wheat	cytosol	59.87	57.1
TraesCS2B01G306500.1	Wheat	cytosol	58.58	55.86
TraesCS2D01G287900.1	Wheat	cytosol	56.96	55.0
Zm00001d025310_P001	Maize	cytosol	52.1	50.16
Zm00001d003852_P001	Maize	cytosol, nucleus, plastid	52.75	49.39
Zm00001d016648_P001	Maize	cytosol	49.51	49.35
Zm00001d052640_P001	Maize	cytosol, extracellular, nucleus	38.51	40.2
Zm00001d052639_P001	Maize	extracellular	40.45	36.98
GSMUA_Achr6P16260_001	Banana	nucleus	37.22	34.12
GSMUA_Achr10P...	Banana	nucleus	33.98	33.02
Zm00001d003613_P002	Maize	nucleus	45.63	32.49
Zm00001d013571_P001	Maize	cytosol, nucleus, plastid	30.1	28.18
GSMUA_Achr6P08300_001	Banana	plastid	30.74	27.46
Zm00001d033419_P001	Maize	plastid	24.27	26.79
Zm00001d029988_P001	Maize	cytosol, mitochondrion, nucleus	28.16	25.89
Zm00001d051484_P001	Maize	nucleus, plastid	28.8	25.21
Zm00001d047069_P001	Maize	cytosol	26.54	24.7
Zm00001d017649_P001	Maize	plastid	26.21	24.47
Zm00001d015130_P001	Maize	cytosol, nucleus, plastid	22.65	19.66
Zm00001d047856_P001	Maize	nucleus, plastid	18.77	17.63
Zm00001d028532_P001	Maize	nucleus, plastid	19.09	17.51

Protein Annotations

EMBL:BT065551	EnsemblPlants:Zm00001d025319_P001	EnsemblPlants:Zm00001d025319_T001	EnsemblPlantsGene:Zm00001d025319	Gene3D:3.30.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016874	InterPro:E3ligase_BOI_like	InterPro:IPR013083	InterPro:Znf_RING/FYVE/PHD	ncoils:Coil
PANTHER:PTHR42647	PANTHER:PTHR42647:SF2	PIRSF:PIRSF036836	ProteinID:AQK43513.1	SEG:seg	UniParc:UPI000194AFD7
UniProt:C0PB82	MapMan:35.2	:	:	:	:

Description

Probable BOI-related E3 ubiquitin-protein ligase 2

Coordinates

chr10:+:114036152..114037488

Molecular Weight (calculated)

31516.6 Da

IEP (calculated)

7.115

GRAVY (calculated)

0.085

Length

309 amino acids

Sequence
(BLAST)

001: MAVQAQHLFA PAFLPHDVGH ALRALEGAAA VGGSALLDEL GLGGCAPAPA ALGDAAFGDA QPRSELTCNA AGDNSVFLPR KRARVVPGFL DVGHQPGFLL
101: DEVQNRCGAA STSGRAAAAS GVLSQLYHQG VEVDALVRVE TDRMRAALQE ARRRHARAVV AVVRGAAEAR LRAAEAELER ARRRGAELEE RLRQLAAEGQ
201: AWLGVARSHE AVAAGLRATL DKVLQQPAVA GGGGGGGEAE DAQSCCFVAS PSGPVSTGSS PSCKACGGGD ACVLVLPCRH LCLCRACEAG AEVCPVCGAV
301: KNASLQVLL

Best Arabidopsis Sequence Match ( AT1G45976.1 )
(BLAST)

001: MALHPHLQDS KNFRDFCGID GQISPELGFN RSENLHDQSQ HPPYIPPFHV AGFAPGPVVQ IDGSDGGNGA DFEWNYGLGL EPRRERIKEQ DFLENNSQIS
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM

Arabidopsis Description

SBP1SBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WK23]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.