Factsheet for Zm00001d025310_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003852_P001	Maize	cytosol, nucleus, plastid	76.95	74.85
OQU81471	Sorghum	mitochondrion	77.26	65.61
Zm00001d010503_P001	Maize	cytosol, mitochondrion	22.12	55.04
Os04t0402500-00	Rice	cytosol	51.4	52.22
Zm00001d025319_P001	Maize	cytosol	50.16	52.1
Zm00001d003850_P001	Maize	extracellular	53.89	51.8
Zm00001d004743_P001	Maize	plastid	25.55	49.7
TraesCS2A01G290100.1	Wheat	cytosol	49.53	49.23
TraesCS2D01G288000.1	Wheat	cytosol	49.22	48.92
TraesCS2B01G306600.1	Wheat	cytosol	47.98	47.68
Zm00001d016648_P001	Maize	cytosol	44.55	46.13
Zm00001d026161_P001	Maize	cytosol	19.94	45.39
Zm00001d052640_P001	Maize	cytosol, extracellular, nucleus	36.14	39.19
Zm00001d052639_P001	Maize	extracellular	35.51	33.73
GSMUA_Achr10P...	Banana	nucleus	33.33	33.65
GSMUA_Achr6P16260_001	Banana	nucleus	34.27	32.64
GSMUA_Achr6P08300_001	Banana	plastid	32.71	30.35
Zm00001d029988_P001	Maize	cytosol, mitochondrion, nucleus	26.17	25.0
Zm00001d047069_P001	Maize	cytosol	25.55	24.7
Zm00001d013571_P001	Maize	cytosol, nucleus, plastid	25.23	24.55
Zm00001d051484_P001	Maize	nucleus, plastid	26.48	24.08
Zm00001d033419_P001	Maize	plastid	20.56	23.57
Zm00001d017649_P001	Maize	plastid	23.36	22.66
Zm00001d003613_P002	Maize	nucleus	28.97	21.43
Zm00001d015130_P001	Maize	cytosol, nucleus, plastid	22.74	20.51
Zm00001d047856_P001	Maize	nucleus, plastid	20.56	20.06
Zm00001d028532_P001	Maize	nucleus, plastid	20.87	19.88

Protein Annotations

EnsemblPlants:Zm00001d025310_P001	EnsemblPlants:Zm00001d025310_T001	EnsemblPlantsGene:Zm00001d025310	Gene3D:3.30.40.10	InterPro:IPR013083	InterPro:Znf_RING/FYVE/PHD
ncoils:Coil	PANTHER:PTHR42647	PANTHER:PTHR42647:SF2	ProteinID:AQK43506.1	SEG:seg	UniParc:UPI000221E32D
UniProt:K7U327	MapMan:35.2	:	:	:	:

Description

Putative RING zinc finger domain superfamily protein

Coordinates

chr10:-:113838140..113839870

Molecular Weight (calculated)

33606.2 Da

IEP (calculated)

7.904

GRAVY (calculated)

-0.055

Length

321 amino acids

Sequence
(BLAST)

001: MAVQARHFSH DLAPAAGGSL FLDEYAGCVP APARIGDDTT VLSDFPRSEL AWCNYGFLPR KRPRLEAAAP AAGGDLLQDQ RVGMPPAGTE RLLPVPPLVD
101: ARSRAVGSGA ATSTSGRVVA VGAATVVSRD IPSSWTHHHG MEIDALVRLE AERMRAALQE ARRRHGRALL AAVGRAASGR LRASETGLER ALHRNAELEE
201: KARQAGAECQ AWVGVARSHE AVAAGLRATL DQLRPRGAAV CVCEAEAEDA RSCCFGEAPA AHANGASMPK LACKSCGSGG ACVLLLPCRH LCLCRVCDEA
301: GVDACPVCAT TRNGSLHVLF S

Best Arabidopsis Sequence Match ( AT4G35070.1 )
(BLAST)

001: MAIQAQLNYN APNANQIGFG GSEFSLINNN GVIGIGNDQS YLVNNLQLQK DFNQHALFHH QHHQQQQSPS QSFLAAQMEK QKQEIDQFIK IQNERLRYVL
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF

Arabidopsis Description

At4g35070 [Source:UniProtKB/TrEMBL;Acc:Q66GR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.