CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 2
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003850_P001	Maize	extracellular	81.32	84.73
Zm00001d025319_P001	Maize	cytosol	70.69	79.61
Os04t0403200-01	Rice	nucleus	64.37	64.55
TraesCS2A01G290000.1	Wheat	cytosol	59.2	63.58
TraesCS2B01G306500.1	Wheat	cytosol	58.62	62.96
TraesCS2D01G287900.1	Wheat	cytosol	56.9	61.88
OQU81469	Sorghum	cytosol	55.75	57.57
EES12084	Sorghum	cytosol, nucleus, plastid	44.25	52.56
EES05161	Sorghum	plastid	51.15	52.51
OQU81471	Sorghum	mitochondrion	53.16	48.94
OQU85032	Sorghum	cytosol	48.56	45.31
OQU83596	Sorghum	cytosol, extracellular	36.21	40.78
OQU83597	Sorghum	cytosol	37.93	38.94
GSMUA_Achr6P16260_001	Banana	nucleus	34.48	35.61
GSMUA_Achr10P...	Banana	nucleus	32.47	35.53
GSMUA_Achr6P08300_001	Banana	plastid	29.31	29.48
EER91098	Sorghum	nucleus	29.31	28.73
Os11t0543100-01	Rice	cytosol	16.09	28.14
KXG38894	Sorghum	cytosol, mitochondrion, nucleus	26.15	26.15
EES05709	Sorghum	nucleus	23.56	23.23
KXG29382	Sorghum	cytosol, mitochondrion, peroxisome, plastid	22.41	21.37
EER95135	Sorghum	plastid	18.1	18.69

Protein Annotations

EnsemblPlants:EES10713	EnsemblPlantsGene:SORBI_3006G063500	EntrezGene:8075244	Gene3D:3.30.40.10	InterPro:E3ligase_BOI_like	InterPro:IPR013083
InterPro:Znf_RING/FYVE/PHD	ncoils:Coil	PANTHER:PTHR42647	PANTHER:PTHR42647:SF2	PIRSF:PIRSF036836	ProteinID:EES10713
ProteinID:EES10713.1	RefSeq:XP_002446385.1	SEG:seg	unigene:Sbi.20970	UniParc:UPI0001A86B2B	UniProt:C5YFF4
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:42256051..42259711

Molecular Weight (calculated)

35945.7 Da

IEP (calculated)

6.491

GRAVY (calculated)

-0.032

Length

348 amino acids

Sequence
(BLAST)

001: MAVQAQHLLN PAFLPHHDLA HAFRALEGAA VGAAVGGNLF LDELGFVGCA PPAPAPIGDA PFVDAQPRSE LTCNGSGGDN NNNVFLPRKR ARVAPGFLDD
101: GSHQQQGLVL PLPLPPHVQV FAGDVQTCRA GGCGAASTSG RAAVASNAVL SQLYHQGVEI DALVRLETER MRAGLQEARR RHARAVVAAV ERAASGRLRA
201: AEADLMRARC RNAELEERLR QLASEGQAWL GVARSHEAVA AGLRATLDQL LLQQQQPAAG ADCGGGEAED AQSCCFETSP SGLVADDAAS RGGASSPPSP
301: SCKSCGGGDA CVLLLPCRHL CLCRACEPAA EVCPVCAAAK NASLQVLL

Best Arabidopsis Sequence Match ( AT3G12920.1 )
(BLAST)

001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS

Arabidopsis Description

BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.