Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87407 | Canola | nucleus | 67.04 | 75.95 |
| Bra035092.1-P | Field mustard | nucleus | 67.04 | 75.95 |
| CDX88507 | Canola | nucleus | 62.57 | 75.17 |
| CDX79294 | Canola | nucleus | 62.01 | 73.03 |
| KRH43767 | Soybean | nucleus | 36.59 | 51.78 |
| VIT_19s0027g00740.t01 | Wine grape | nucleus | 41.9 | 48.54 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 24.58 | 46.81 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 29.61 | 46.09 |
| KRH13682 | Soybean | nucleus | 43.02 | 45.7 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 35.75 | 44.76 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 30.17 | 44.26 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 30.17 | 43.72 |
| AT3G12920.1 | Thale cress | nucleus | 40.22 | 42.99 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 27.65 | 41.08 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 34.08 | 40.94 |
| AT5G45100.1 | Thale cress | cytosol | 33.52 | 40.82 |
| AT4G19700.1 | Thale cress | cytosol | 34.08 | 40.13 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 32.4 | 36.14 |
| TraesCS7D01G431300.1 | Wheat | mitochondrion | 30.17 | 34.5 |
| TraesCS6A01G079900.1 | Wheat | cytosol, mitochondrion, plastid | 22.91 | 34.31 |
| TraesCS3D01G441300.1 | Wheat | mitochondrion | 27.65 | 34.14 |
| TraesCS3D01G441000.1 | Wheat | mitochondrion | 27.65 | 34.14 |
| HORVU4Hr1G003180.3 | Barley | mitochondrion | 28.77 | 33.55 |
| TraesCS3A01G448500.1 | Wheat | mitochondrion | 27.09 | 33.11 |
| TraesCS4D01G018100.1 | Wheat | mitochondrion, nucleus | 27.93 | 33.0 |
| TraesCS3B01G484600.1 | Wheat | cytosol | 25.14 | 32.73 |
| TraesCS7B01G340600.1 | Wheat | mitochondrion | 28.21 | 32.37 |
| HORVU7Hr1G100520.1 | Barley | cytosol, mitochondrion | 27.65 | 32.25 |
| TraesCS7A01G442300.1 | Wheat | mitochondrion | 28.49 | 32.18 |
| TraesCS4B01G019600.1 | Wheat | mitochondrion | 27.65 | 31.94 |
| TraesCS7A01G442100.1 | Wheat | mitochondrion | 27.93 | 31.85 |
| TraesCS4A01G293700.1 | Wheat | mitochondrion | 27.37 | 31.82 |
| TraesCS7B01G340500.1 | Wheat | mitochondrion | 27.93 | 31.75 |
| TraesCS7B01G340700.1 | Wheat | mitochondrion | 27.65 | 31.73 |
| Zm00001d013571_P001 | Maize | cytosol, nucleus, plastid | 28.77 | 31.21 |
| TraesCS7D01G431100.1 | Wheat | mitochondrion, nucleus | 27.09 | 30.89 |
| TraesCS7D01G431200.1 | Wheat | mitochondrion | 26.54 | 30.84 |
| EER91098 | Sorghum | nucleus | 30.45 | 30.7 |
| TraesCS7A01G441900.1 | Wheat | mitochondrion | 26.82 | 30.38 |
| HORVU7Hr1G100540.2 | Barley | mitochondrion | 25.7 | 30.26 |
| TraesCS6A01G120700.1 | Wheat | nucleus | 22.07 | 30.04 |
| TraesCS6D01G073600.1 | Wheat | cytosol, nucleus, plastid | 22.07 | 29.15 |
| HORVU6Hr1G021880.1 | Barley | plastid | 21.23 | 29.12 |
| HORVU6Hr1G021960.1 | Barley | plastid | 21.23 | 29.12 |
| TraesCS6B01G149100.1 | Wheat | nucleus | 21.23 | 28.9 |
| TraesCS6D01G110700.1 | Wheat | nucleus | 21.23 | 28.9 |
| Zm00001d033419_P001 | Maize | plastid | 20.11 | 25.71 |
| AT4G35070.1 | Thale cress | cytosol | 18.72 | 25.28 |
| AT5G47050.1 | Thale cress | nucleus | 20.67 | 24.67 |
| AT1G32740.1 | Thale cress | nucleus | 21.23 | 24.36 |
| AT1G45976.1 | Thale cress | cytosol | 20.11 | 22.15 |
| AT4G17680.1 | Thale cress | nucleus | 19.27 | 21.97 |
| AT1G10650.1 | Thale cress | nucleus | 18.72 | 19.76 |
| AT1G60610.4 | Thale cress | nucleus | 18.16 | 19.12 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:844252 | ProteinID:AAC17064.1 | ProteinID:AEE36205.1 | ProteinID:AEE36206.1 |
| EMBL:AK229952 | EMBL:AK230039 | EMBL:AK230118 | ArrayExpress:AT1G79110 | EnsemblPlantsGene:AT1G79110 | RefSeq:AT1G79110 |
| TAIR:AT1G79110 | RefSeq:AT1G79110-TAIR-G | EnsemblPlants:AT1G79110.1 | TAIR:AT1G79110.1 | EMBL:AY087533 | UniProt:F4IDI6 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008219 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0043067 | GO:GO:0043161 | GO:GO:0046872 | InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_565200.1 |
| RefSeq:NP_974174.1 | PFAM:PF13920 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS50089 | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF7 | UniParc:UPI000016330A | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BRG2Probable BOI-related E3 ubiquitin-protein ligase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IDI6]
Coordinates
chr1:+:29759158..29760691
Molecular Weight (calculated)
40087.2 Da
IEP (calculated)
7.164
GRAVY (calculated)
-0.637
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDAHHLFL SPPQLFSNRE LTMNNNTMEP TSGGFCNNNQ TGYGVVSPFS VPNHTSTTTT ATPPLLHVYG GSDTIPTTAG YYADGATNLD CEFFPLPTRK
101: RSRDSSRSNY HHLLLQNPRS SSCVNAATTT TTTTLFSFLG QDIDISSHMN QQQHEIDRFV SLHLYQMERV KYEIEEKRKR QARTIMEAIE QGLVKRLRVK
201: EEERERIGKV NHALEERVKS LSIENQIWRD LAQTNEATAN HLRTNLEHVL AQVKDVSRGA GLEKNMNEED DAESCCGSSC GGGGEETVRR RVGLEREAQD
301: KAERRRRRMC RNCGEEESCV LLLPCRHLCL CGVCGSSVHT CPICTSPKNA SVHVNMSS
101: RSRDSSRSNY HHLLLQNPRS SSCVNAATTT TTTTLFSFLG QDIDISSHMN QQQHEIDRFV SLHLYQMERV KYEIEEKRKR QARTIMEAIE QGLVKRLRVK
201: EEERERIGKV NHALEERVKS LSIENQIWRD LAQTNEATAN HLRTNLEHVL AQVKDVSRGA GLEKNMNEED DAESCCGSSC GGGGEETVRR RVGLEREAQD
301: KAERRRRRMC RNCGEEESCV LLLPCRHLCL CGVCGSSVHT CPICTSPKNA SVHVNMSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.