Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol, extracellular, nucleus, plastid | 58.88 | 58.68 |
| GSMUA_Achr6P11810_001 | Banana | nucleus | 61.67 | 58.22 |
| GSMUA_Achr11P... | Banana | nucleus | 56.1 | 50.47 |
| GSMUA_Achr10P... | Banana | nucleus | 54.01 | 48.74 |
| GSMUA_Achr6P16260_001 | Banana | nucleus | 48.78 | 41.54 |
| GSMUA_Achr6P08300_001 | Banana | plastid | 44.95 | 37.28 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 21.6 | 32.98 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 25.44 | 31.74 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 26.13 | 30.36 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 25.09 | 29.88 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 24.39 | 28.69 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 27.87 | 27.97 |
| GSMUA_Achr2P12040_001 | Banana | plastid | 25.09 | 26.77 |
| GSMUA_Achr1P00560_001 | Banana | nucleus | 26.13 | 25.95 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 26.13 | 25.17 |
| GSMUA_Achr4P21690_001 | Banana | nucleus | 28.22 | 25.0 |
| GSMUA_Achr2P18250_001 | Banana | nucleus | 28.57 | 24.85 |
| GSMUA_Achr10P... | Banana | nucleus | 27.18 | 24.53 |
| GSMUA_Achr8P14860_001 | Banana | nucleus | 27.87 | 23.74 |
| GSMUA_Achr6P10180_001 | Banana | plastid | 27.87 | 23.05 |
| GSMUA_Achr4P30100_001 | Banana | plastid | 24.39 | 22.95 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 25.09 | 22.43 |
| GSMUA_Achr11P... | Banana | nucleus | 27.53 | 21.12 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P21330_001 | EnsemblPlants:GSMUA_Achr2T21330_001 | EnsemblPlantsGene:GSMUA_Achr2G21330_001 | Gene3D:1.10.1170.10 | Gene3D:1.10.533.10 | InterPro:E3ligase_BOI_like |
| InterPro:IPR001841 | InterPro:Znf_RING | ncoils:Coil | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF2 | PFscan:PS50089 |
| PIRSF:PIRSF036836 | UniParc:UPI000295099B | UniProt:M0S9X4 | MapMan:35.1 | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G21330_001]
Coordinates
chr2:+:20852721..20855251
Molecular Weight (calculated)
31760.7 Da
IEP (calculated)
6.495
GRAVY (calculated)
-0.412
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNNATVFTD PQSELTCNAS GSRKRAREES MPSPLLAPQF RGPNSATASL NPVGDKNICG ILPQYRLLES SATSTSDRFV SASQAVSPLF RDLISLIYQQ
101: TLEMDALVRL QNERLRTGLE EARKRHCRVF LSAMEQQVTK RLMEKEAELE RAVRRNAELE EKVRQMSEEN QIWFSMAKNN EAAVSSLKAS LGHALLQNAA
201: VAAREGYGDS KSTPLAADDA HSCCFEVEED DTRWRMTCRA CRGTDACFLL LPCRHVSLCK DCEPEADACP VCGSAKNACV QVRFGSS
101: TLEMDALVRL QNERLRTGLE EARKRHCRVF LSAMEQQVTK RLMEKEAELE RAVRRNAELE EKVRQMSEEN QIWFSMAKNN EAAVSSLKAS LGHALLQNAA
201: VAAREGYGDS KSTPLAADDA HSCCFEVEED DTRWRMTCRA CRGTDACFLL LPCRHVSLCK DCEPEADACP VCGSAKNACV QVRFGSS
001: MLSGNNGNTA PPVFMNENQL QYQTNLRSNQ LHLLGNMGGG CTVDPVNYFA NDNLVPMIRP NKRGREAESI SNNIQRQQQK LQMSLNYNYN NTSVREEVPK
101: ENLVSTGLRL SYDDDEHNSS VTSASGSILA ASPIFQSLDD SLRIDLHRQK DEFDQFIKIQ AAQMAKGVRD MKQRHIASFL TTLEKGVSKK LQEKDHEIND
201: MNKKNKELVE RIKQVAMEAQ NWHYRAKYNE SVVNVLKANL QQAMSHNNSV IAAADQGKEG FGDSEIDDAA SSYIDPNNNN NNNMGIHQRM RCKMCNVKEV
301: SVLIVPCRHL SLCKECDVFT KICPVCKSLK SSCVQVFFS
101: ENLVSTGLRL SYDDDEHNSS VTSASGSILA ASPIFQSLDD SLRIDLHRQK DEFDQFIKIQ AAQMAKGVRD MKQRHIASFL TTLEKGVSKK LQEKDHEIND
201: MNKKNKELVE RIKQVAMEAQ NWHYRAKYNE SVVNVLKANL QQAMSHNNSV IAAADQGKEG FGDSEIDDAA SSYIDPNNNN NNNMGIHQRM RCKMCNVKEV
301: SVLIVPCRHL SLCKECDVFT KICPVCKSLK SSCVQVFFS
Arabidopsis Description
Putative S-ribonuclease binding protein SBP1 [Source:UniProtKB/TrEMBL;Acc:Q84JF9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.