Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol, extracellular, nucleus, plastid | 51.41 | 56.94 |
| GSMUA_Achr6P11810_001 | Banana | nucleus | 53.6 | 56.25 |
| GSMUA_Achr2P21330_001 | Banana | nucleus | 50.47 | 56.1 |
| GSMUA_Achr10P... | Banana | nucleus | 47.96 | 48.11 |
| GSMUA_Achr6P16260_001 | Banana | nucleus | 50.78 | 48.07 |
| GSMUA_Achr6P08300_001 | Banana | plastid | 42.63 | 39.31 |
| GSMUA_Achr4P23050_001 | Banana | nucleus | 18.5 | 31.38 |
| GSMUA_Achr7P00850_001 | Banana | plastid | 22.26 | 30.87 |
| GSMUA_Achr2P13160_001 | Banana | plastid | 23.51 | 30.36 |
| GSMUA_Achr5P02100_001 | Banana | plastid | 22.26 | 29.1 |
| GSMUA_Achr4P28300_001 | Banana | nucleus | 21.94 | 29.05 |
| GSMUA_Achr4P32070_001 | Banana | nucleus | 26.02 | 29.02 |
| GSMUA_Achr6P31690_001 | Banana | nucleus | 25.08 | 26.85 |
| GSMUA_Achr10P... | Banana | nucleus | 26.02 | 26.1 |
| GSMUA_Achr6P10180_001 | Banana | plastid | 27.9 | 25.65 |
| GSMUA_Achr1P00560_001 | Banana | nucleus | 22.57 | 24.91 |
| GSMUA_Achr2P12040_001 | Banana | plastid | 20.69 | 24.54 |
| GSMUA_Achr4P21690_001 | Banana | nucleus | 24.45 | 24.07 |
| GSMUA_Achr11P... | Banana | nucleus | 27.9 | 23.8 |
| GSMUA_Achr2P18250_001 | Banana | nucleus | 23.82 | 23.03 |
| GSMUA_Achr9P09830_001 | Banana | nucleus | 22.88 | 22.74 |
| GSMUA_Achr4P30100_001 | Banana | plastid | 21.63 | 22.62 |
| GSMUA_Achr8P14860_001 | Banana | nucleus | 22.26 | 21.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P11600_001 | EnsemblPlants:GSMUA_Achr11T11600_001 | EnsemblPlantsGene:GSMUA_Achr11G11600_001 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF3 | PFAM:PF13920 |
| PFscan:PS50089 | SEG:seg | UniParc:UPI000296A832 | UniProt:M0RRE0 | MapMan:35.1 | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G11600_001]
Coordinates
chr11:+:10246927..10248334
Molecular Weight (calculated)
34801.6 Da
IEP (calculated)
7.874
GRAVY (calculated)
-0.425
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVQARPLSD AFSPDLRNRG RAGKGALGDL QAMQDHLGLH AGLGLGKQPR RHHRQEIFNG ATVSSDPRSE LTCNASASRK RAREESMAAT VNNISGVRLL
101: ESGSASTSGR QAPSSQPASP LARDLVSLLY QQNLEIDALV RLESERLRAG MGETCERRCR ALVSGLEQQV VKRLMEKEAE LECVNRRNAE LEQQMRQVSE
201: ENKIWFAMAK NNEAVVCSLR TSLEQALLRS AAGEGGEGQE GYGDSEAAKL LVDDAQSCCF GVEERVQRRT VCRACGKKDV CVLLLPCKHL SLCKDCESKA
301: HACPICGSSK EVSLQIFMC
101: ESGSASTSGR QAPSSQPASP LARDLVSLLY QQNLEIDALV RLESERLRAG MGETCERRCR ALVSGLEQQV VKRLMEKEAE LECVNRRNAE LEQQMRQVSE
201: ENKIWFAMAK NNEAVVCSLR TSLEQALLRS AAGEGGEGQE GYGDSEAAKL LVDDAQSCCF GVEERVQRRT VCRACGKKDV CVLLLPCKHL SLCKDCESKA
301: HACPICGSSK EVSLQIFMC
001: MALHPHLQDS KNFRDFCGID GQISPELGFN RSENLHDQSQ HPPYIPPFHV AGFAPGPVVQ IDGSDGGNGA DFEWNYGLGL EPRRERIKEQ DFLENNSQIS
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM
101: SIDFLQARSV STGLGLSLDN ARVASSDGSA LLSLVGDDID RELQRQDADI DRFLKIQGDQ LRHAILDKIK RGQQKTVSLM EEKVVQKLRE KDEELERINR
201: KNKELEVRME QLTMEAEAWQ QRAKYNENMI AALNYNLDRA QGRPRDSIEG CGDSEVDDTA SCFNGRDNSN NNTKTMMMCR FCGVREMCML LLPCNHMCLC
301: KECERKLSSC PLCQSSKFLG MEVYM
Arabidopsis Description
SBP1SBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WK23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.