Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0402500-00 | Rice | cytosol | 38.15 | 20.89 |
| Os04t0403200-01 | Rice | nucleus | 36.99 | 18.44 |
| Zm00001d052640_P001 | Maize | cytosol, extracellular, nucleus | 24.86 | 14.53 |
| OQU83596 | Sorghum | cytosol, extracellular | 24.28 | 13.59 |
| Os11t0542100-01 | Rice | cytosol | 23.7 | 12.54 |
| Zm00001d052639_P001 | Maize | extracellular | 21.39 | 10.95 |
| OQU83597 | Sorghum | cytosol | 21.39 | 10.91 |
| GSMUA_Achr10P... | Banana | nucleus | 19.08 | 10.38 |
| GSMUA_Achr6P16260_001 | Banana | nucleus | 19.08 | 9.79 |
| GSMUA_Achr6P08300_001 | Banana | plastid | 19.08 | 9.54 |
| Os03t0263800-01 | Rice | nucleus, plastid | 17.92 | 9.06 |
| Os02t0687500-01 | Rice | cytosol, nucleus, plastid | 15.61 | 8.49 |
| Os02t0130300-02 | Rice | cytosol, nucleus, plastid | 16.18 | 8.16 |
| Os10t0565500-01 | Rice | nucleus | 15.61 | 7.69 |
| Os11t0543100-01 | Rice | cytosol | 1.73 | 1.51 |
Protein Annotations
| EnsemblPlants:Os02t0246101-00 | EnsemblPlantsGene:Os02g0246101 | Gene3D:3.30.40.10 | InterPro:E3ligase_BOI_like | InterPro:IPR013083 | InterPro:Znf_RING/FYVE/PHD |
| PANTHER:PTHR42647 | PANTHER:PTHR42647:SF2 | PIRSF:PIRSF036836 | ProteinID:BAS77874.1 | SEG:seg | UniParc:UPI0003938DFA |
| UniProt:A0A0P0VH23 | MapMan:35.2 | : | : | : | : |
Description
Similar to SKIP interacting protein 23 (Fragment). (Os02t0246101-00)
Coordinates
chr2:-:8261247..8261809
Molecular Weight (calculated)
18051.8 Da
IEP (calculated)
8.041
GRAVY (calculated)
0.199
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: LLQSPYAVAA ATGEGDAEDA QSCCFETPGG GAAATAADAV SGATSCKACR VTEAFVPLLP CRRLCLCGTC EAAVDACPVC ATTKIASVHV LLSCSHSYVP
101: HQPLHGVGNF DSATAMARPK PGIRQPTPVS SKLTTIILSQ VTWKFMLGKP RFCASVISGP CEFCRWKQQC SVR
101: HQPLHGVGNF DSATAMARPK PGIRQPTPVS SKLTTIILSQ VTWKFMLGKP RFCASVISGP CEFCRWKQQC SVR
001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS
Arabidopsis Description
BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.