Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40647 | Canola | cytosol | 90.17 | 89.79 |
| CDY52651 | Canola | cytosol | 67.52 | 71.49 |
| CDX76311 | Canola | cytosol | 76.92 | 71.15 |
| CDX73168 | Canola | cytosol | 76.07 | 70.92 |
| CDY15019 | Canola | cytosol | 76.07 | 70.92 |
| CDX69109 | Canola | nucleus | 61.97 | 70.73 |
| CDY17506 | Canola | cytosol, nucleus, plastid | 75.64 | 69.96 |
| AT4G35070.1 | Thale cress | cytosol | 72.65 | 64.15 |
| VIT_03s0038g02450.t01 | Wine grape | nucleus | 38.46 | 41.67 |
| Solyc01g111610.2.1 | Tomato | cytosol | 40.17 | 38.68 |
| PGSC0003DMT400015829 | Potato | nucleus | 41.03 | 38.1 |
| PGSC0003DMT400068728 | Potato | mitochondrion, nucleus | 42.31 | 37.5 |
| Solyc10g055560.1.1 | Tomato | nucleus | 41.88 | 36.3 |
| KRH51394 | Soybean | nucleus | 39.32 | 32.06 |
| KRH24321 | Soybean | cytosol | 36.75 | 29.86 |
| KRH29000 | Soybean | cytosol | 36.32 | 29.62 |
| KRH60696 | Soybean | nucleus, plastid | 36.75 | 29.45 |
| KRG94235 | Soybean | cytosol | 31.2 | 29.44 |
| CDY34127 | Canola | extracellular | 7.26 | 28.33 |
| CDY09609 | Canola | cytosol | 23.5 | 22.27 |
| CDY40841 | Canola | cytosol | 26.5 | 20.74 |
| CDY43447 | Canola | nucleus | 26.07 | 20.2 |
| CDY09318 | Canola | cytosol | 20.09 | 20.09 |
| CDY07541 | Canola | cytosol | 20.09 | 20.09 |
| CDX94520 | Canola | cytosol | 20.09 | 20.09 |
| CDY21311 | Canola | cytosol | 20.09 | 20.09 |
| CDX77733 | Canola | nucleus | 25.64 | 20.0 |
| CDY33511 | Canola | nucleus | 25.64 | 19.8 |
| CDY26402 | Canola | cytosol | 24.79 | 19.59 |
| CDY51856 | Canola | cytosol | 25.21 | 19.47 |
| CDX88507 | Canola | nucleus | 24.79 | 19.46 |
| CDX79294 | Canola | nucleus | 25.21 | 19.41 |
| CDX87407 | Canola | nucleus | 26.07 | 19.3 |
| CDY17048 | Canola | cytosol | 25.64 | 19.29 |
| CDY17103 | Canola | cytosol | 24.36 | 19.26 |
| CDX90458 | Canola | cytosol | 24.79 | 19.08 |
| CDY37172 | Canola | cytosol | 24.36 | 18.87 |
| CDY18062 | Canola | cytosol | 22.65 | 18.79 |
| CDY06767 | Canola | cytosol | 24.36 | 18.75 |
| CDY03162 | Canola | cytosol | 25.64 | 18.63 |
| CDY24237 | Canola | nucleus | 25.64 | 18.52 |
| CDY43390 | Canola | cytosol | 25.64 | 18.46 |
| CDY46345 | Canola | cytosol | 22.22 | 18.44 |
| CDY13070 | Canola | cytosol | 21.79 | 18.28 |
| CDY71192 | Canola | cytosol | 21.79 | 18.21 |
| CDY51918 | Canola | cytosol | 22.22 | 18.12 |
| CDY01615 | Canola | cytosol | 23.5 | 18.03 |
| CDY71607 | Canola | cytosol | 23.08 | 17.65 |
| CDX82568 | Canola | nucleus | 25.64 | 17.65 |
| CDY64561 | Canola | nucleus | 25.21 | 17.35 |
| CDX93396 | Canola | cytosol | 21.79 | 15.18 |
| CDY20611 | Canola | nucleus | 21.37 | 14.66 |
| CDY37958 | Canola | cytosol, plastid | 20.94 | 14.45 |
| CDY24542 | Canola | nucleus | 20.09 | 14.37 |
| CDY20963 | Canola | nucleus | 20.51 | 14.2 |
| CDY23552 | Canola | cytosol | 8.97 | 9.68 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078CC22 |
| EnsemblPlants:CDX72513 | ProteinID:CDX72513 | ProteinID:CDX72513.1 | ncoils:Coil | InterPro:E3ligase_BOI_like | EnsemblPlantsGene:GSBRNA2T00100047001 |
| InterPro:IPR013083 | PIRSF:PIRSF036836 | PANTHER:PTHR42647 | PANTHER:PTHR42647:SF6 | UniPathway:UPA00144 | UniParc:UPI0004EB76A2 |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
BnaC07g45350D
Coordinates
chrLK031796:+:1655950..1657042
Molecular Weight (calculated)
26556.8 Da
IEP (calculated)
6.498
GRAVY (calculated)
-0.498
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIQAQLSYN APFIGTGGSE LSLINNDGGI GINQSYMNNQ QALFHTQQNR SQSFFDVHME KQRREIDQFI RIQSERLRYA LQEQRRQVTE TILRKMEAKA
101: LVLMAQKEEE MSRALSKNME LENLLRKMET ENRTWQRVAR ENEAMVATLN STLEKVRERA VVNDATTAED EGSFCGGDDG DGGGCCLNCG SYGETRVLFL
201: PCRHLCCCTR CEAGLVLCPI CNTPKKHRIE AFVF
101: LVLMAQKEEE MSRALSKNME LENLLRKMET ENRTWQRVAR ENEAMVATLN STLEKVRERA VVNDATTAED EGSFCGGDDG DGGGCCLNCG SYGETRVLFL
201: PCRHLCCCTR CEAGLVLCPI CNTPKKHRIE AFVF
001: MAIQAQLNYN APNANQIGFG GSEFSLINNN GVIGIGNDQS YLVNNLQLQK DFNQHALFHH QHHQQQQSPS QSFLAAQMEK QKQEIDQFIK IQNERLRYVL
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF
101: QEQRKREMEM ILRKMESKAL LLMSQKEEEM SKALNKNMEL EDLLRKMEME NQTWQRMARE NEAIVQTLNT TLEQVRERAA TCYDAGEAEV EDEGSFCGGE
201: GDGNSLPAKK MKMSSCCCNC GSNGVTRVLF LPCRHLCCCM DCEEGLLLCP ICNTPKKSRI EALIF
Arabidopsis Description
At4g35070 [Source:UniProtKB/TrEMBL;Acc:Q66GR4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.