Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32642 | Canola | plastid | 72.82 | 34.88 |
| CDY38850 | Canola | plastid | 72.82 | 34.88 |
| AT5G51110.1 | Thale cress | plastid | 72.82 | 34.09 |
| VIT_16s0013g00240.t01 | Wine grape | plastid | 51.46 | 25.24 |
| KRH70391 | Soybean | plastid | 50.49 | 24.19 |
| KRH33344 | Soybean | plastid | 48.54 | 23.15 |
| GSMUA_Achr2P18260_001 | Banana | plastid | 47.57 | 22.58 |
| PGSC0003DMT400013443 | Potato | plastid | 41.75 | 20.38 |
| CDY35274 | Canola | cytosol | 22.33 | 19.66 |
| CDX90215 | Canola | cytosol | 21.36 | 18.97 |
| TraesCS5A01G545700.1 | Wheat | plastid | 37.86 | 18.57 |
| EER93165 | Sorghum | plastid | 37.86 | 18.31 |
| Zm00001d034715_P001 | Maize | plastid | 37.86 | 17.89 |
| TraesCS4B01G379500.1 | Wheat | plastid | 35.92 | 16.97 |
| CDY26312 | Canola | mitochondrion | 30.1 | 16.85 |
| CDX99857 | Canola | mitochondrion | 30.1 | 16.85 |
| TraesCSU01G129700.1 | Wheat | plastid | 34.95 | 16.74 |
| Os03t0100200-01 | Rice | plastid | 31.07 | 15.76 |
| HORVU4Hr1G090300.6 | Barley | plastid | 13.59 | 5.47 |
Protein Annotations
| KEGG:00790+4.2.1.96 | Gene3D:3.30.1360.20 | MapMan:35.1 | GO:A0A078C6A4 | EnsemblPlants:CDX71689 | ProteinID:CDX71689 |
| ProteinID:CDX71689.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006729 | GO:GO:0008124 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00152366001 | InterPro:IPR036428 |
| InterPro:PCD_sf | PFAM:PF01329 | PANTHER:PTHR12599 | PANTHER:PTHR12599:SF8 | MetaCyc:PWY-7158 | InterPro:Pterin_deHydtase |
| SUPFAM:SSF55248 | UniParc:UPI0004EC28F6 | SEG:seg | : | : | : |
Description
BnaC09g27300D
Coordinates
chrLK031794:-:3048073..3048698
Molecular Weight (calculated)
11492.0 Da
IEP (calculated)
8.110
GRAVY (calculated)
0.059
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLFSLSLSQ LQCSPVSPSQ TLLSADDARK LLHKILGWSI VEDEAGGLKI RCMCKVRDFG YGVELINRIH KVAEASVHFP SLHLESHTQV RADYLSRPLA
101: HLL
101: HLL
001: MAATSSSPPC NISASSLLLR QPSRSILKVF GLLPPVSRNN RKLGRLTVTR SNLAQDFLGD FGARDPYPEE IASQFGDKVL GCQSTEHKIL IPNASVLSLS
101: QLQCSPVSSS QPPLSGDDAR TLLHKVLGWS IVDNEAGGLK IRCMWKVRDF GCGVELINRI HKVAEASGHY PSLHLESPTQ VRAELFTSSI GGLSMNDFIM
201: AAKIDDIKTS DLSPRKRAWA
101: QLQCSPVSSS QPPLSGDDAR TLLHKVLGWS IVDNEAGGLK IRCMWKVRDF GCGVELINRI HKVAEASGHY PSLHLESPTQ VRAELFTSSI GGLSMNDFIM
201: AAKIDDIKTS DLSPRKRAWA
Arabidopsis Description
ATP1Probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU63]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.