Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33344 | Soybean | plastid | 84.65 | 84.26 |
| VIT_16s0013g00240.t01 | Wine grape | plastid | 60.0 | 61.43 |
| AT5G51110.1 | Thale cress | plastid | 57.21 | 55.91 |
| CDY32642 | Canola | plastid | 54.88 | 54.88 |
| GSMUA_Achr2P18260_001 | Banana | plastid | 54.88 | 54.38 |
| Bra029188.1-P | Field mustard | plastid | 53.49 | 53.49 |
| CDY38850 | Canola | plastid | 53.49 | 53.49 |
| CDX71689 | Canola | cytosol | 24.19 | 50.49 |
| PGSC0003DMT400013443 | Potato | plastid | 47.44 | 48.34 |
| Zm00001d034715_P001 | Maize | plastid | 45.58 | 44.95 |
| Os03t0100200-01 | Rice | plastid | 41.86 | 44.34 |
| TraesCS5A01G545700.1 | Wheat | plastid | 43.26 | 44.29 |
| TraesCS4B01G379500.1 | Wheat | plastid | 44.65 | 44.04 |
| TraesCSU01G129700.1 | Wheat | plastid | 43.72 | 43.72 |
| EER93165 | Sorghum | plastid | 42.79 | 43.19 |
| KRH21339 | Soybean | cytosol | 21.86 | 35.34 |
| KRH42974 | Soybean | cytosol | 20.93 | 34.09 |
| KRH10960 | Soybean | mitochondrion | 24.19 | 28.89 |
| HORVU4Hr1G090300.6 | Barley | plastid | 23.26 | 19.53 |
Protein Annotations
| KEGG:00790+4.2.1.96 | MapMan:1.2.1.2.6 | EntrezGene:100815328 | Gene3D:3.30.1360.20 | EMBL:ACUP02000769 | EnsemblPlantsGene:GLYMA_02G087800 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006729 | GO:GO:0008124 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1JDK1 | InterPro:IPR036428 | EnsemblPlants:KRH70391 | ProteinID:KRH70391 |
| ProteinID:KRH70391.1 | InterPro:PCD_sf | PFAM:PF01329 | PANTHER:PTHR12599 | PANTHER:PTHR12599:SF8 | MetaCyc:PWY-7158 |
| InterPro:Pterin_deHydtase | SUPFAM:SSF55248 | UniParc:UPI0002337348 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:7676883..7680136
Molecular Weight (calculated)
23511.6 Da
IEP (calculated)
7.941
GRAVY (calculated)
0.029
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITGNLNLN LVLPVARPMA CPPRAPTSLL ARGRGASSSP SLLVTRAIDV NEFLGDFGAR DPFPAELESS FGEKVLGYSN TEHKILIPTI TALALSQQEC
101: APVSPSQPPI SLDDAQTLIR KVVGWRLVNE EGGLKIQCLW KLRDFKCGVE LINRISKVVE ALGHFPNIYL EQPNQVRAEL WTASIGGLTM NDFIVAAKID
201: EIKTSDLVPR KRVWA
101: APVSPSQPPI SLDDAQTLIR KVVGWRLVNE EGGLKIQCLW KLRDFKCGVE LINRISKVVE ALGHFPNIYL EQPNQVRAEL WTASIGGLTM NDFIVAAKID
201: EIKTSDLVPR KRVWA
001: MAATSSSPPC NISASSLLLR QPSRSILKVF GLLPPVSRNN RKLGRLTVTR SNLAQDFLGD FGARDPYPEE IASQFGDKVL GCQSTEHKIL IPNASVLSLS
101: QLQCSPVSSS QPPLSGDDAR TLLHKVLGWS IVDNEAGGLK IRCMWKVRDF GCGVELINRI HKVAEASGHY PSLHLESPTQ VRAELFTSSI GGLSMNDFIM
201: AAKIDDIKTS DLSPRKRAWA
101: QLQCSPVSSS QPPLSGDDAR TLLHKVLGWS IVDNEAGGLK IRCMWKVRDF GCGVELINRI HKVAEASGHY PSLHLESPTQ VRAELFTSSI GGLSMNDFIM
201: AAKIDDIKTS DLSPRKRAWA
Arabidopsis Description
ATP1Probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU63]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.