Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0455400-01 | Rice | cytosol, mitochondrion, nucleus | 13.86 | 92.0 |
| KRH32028 | Soybean | nucleus | 87.35 | 89.32 |
| CDX76672 | Canola | nucleus | 11.04 | 79.71 |
| CDY11458 | Canola | nucleus | 11.04 | 79.71 |
| CDY42264 | Canola | nucleus | 11.04 | 79.71 |
| CDX91311 | Canola | cytosol | 12.85 | 61.54 |
| CDY10535 | Canola | nucleus | 40.56 | 57.39 |
| CDY22074 | Canola | nucleus | 40.36 | 56.94 |
| CDY21909 | Canola | nucleus | 40.56 | 56.9 |
| VIT_07s0151g00910.t01 | Wine grape | nucleus | 52.61 | 55.86 |
| Bra036246.1-P | Field mustard | nucleus | 40.96 | 55.43 |
| Bra007711.1-P | Field mustard | nucleus | 33.13 | 54.82 |
| AT4G02720.1 | Thale cress | nucleus | 43.98 | 51.9 |
| GSMUA_Achr9P15340_001 | Banana | nucleus | 47.19 | 49.58 |
| Zm00001d020706_P001 | Maize | mitochondrion, nucleus, plastid | 48.39 | 48.3 |
| CDY58145 | Canola | nucleus | 34.14 | 47.09 |
| KXG35759 | Sorghum | nucleus | 48.59 | 46.99 |
| TraesCS5B01G235300.1 | Wheat | plastid | 49.2 | 46.85 |
| HORVU5Hr1G068120.2 | Barley | nucleus | 44.98 | 46.67 |
| TraesCS5A01G237400.1 | Wheat | plastid | 49.2 | 46.67 |
| CDY70496 | Canola | nucleus | 33.94 | 46.3 |
| Solyc11g071660.1.1 | Tomato | nucleus | 48.8 | 45.42 |
| TraesCS5D01G244100.1 | Wheat | mitochondrion, nucleus, plastid | 48.59 | 45.23 |
| PGSC0003DMT400097185 | Potato | nucleus | 48.39 | 44.88 |
| CDY53463 | Canola | nucleus | 33.53 | 44.06 |
| HORVU5Hr1G068130.1 | Barley | nucleus, plastid | 48.8 | 43.55 |
| Bra032050.1-P | Field mustard | nucleus | 33.13 | 43.31 |
Protein Annotations
| EntrezGene:100792985 | MapMan:17.1.1.1.3 | EMBL:ACUP02000898 | EnsemblPlantsGene:GLYMA_02G146600 | GO:GO:0003674 | GO:GO:0003682 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007219 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | UniProt:I1JF97 | EnsemblPlants:KRH71411 |
| ProteinID:KRH71411 | ProteinID:KRH71411.1 | InterPro:NKAP | PFAM:PF06047 | PANTHER:PTHR13087 | PANTHER:PTHR13087:SF0 |
| UniParc:UPI0002336D02 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:15131658..15134291
Molecular Weight (calculated)
57151.2 Da
IEP (calculated)
9.999
GRAVY (calculated)
-1.663
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPSSTIEI PHERHRHNGR RTPDSDISDD YRRRRSPSYD SYDRHTERHR RCSESPEHRS PRHTNGTHND NTLPKKFGRR NGAYLDRDRG DWQRSDSESD
101: EELKGLNYEE FRRLKRQKMR KSLKHCIWNV TPSPPRRDNE DPEDYSKPDE ISDRDDGAGK IDKEIKAKAK AKSESESDSD SESEKSVSSE SDGSRSRKKK
201: RKSSAGSSRR SYSESESESE SESESESESE SEEEERRRRK SRRNRRKRSN RSRKKRRYSD SDEREDSESD DSDSSGRKKK KRSSSSKSRS KRIRRSRKRT
301: NRSPETEGEG SDLEEENGSG SGDAKSKTTV DEVMKTEINA EAIKLKELFE SQKKPALDNE PAVGPMPLPR AEGHISYGGA LRPGEGDAIA QYVQQGKRIP
401: RRGEVGLSAE EIQKFESLGY VMSGSRHQRM NAIRIRKENQ VYSAEDKRAL AMFNYEEKAK REHKVMADLQ RLVQRHIGQD VGPTHDPFAA KASDGADA
101: EELKGLNYEE FRRLKRQKMR KSLKHCIWNV TPSPPRRDNE DPEDYSKPDE ISDRDDGAGK IDKEIKAKAK AKSESESDSD SESEKSVSSE SDGSRSRKKK
201: RKSSAGSSRR SYSESESESE SESESESESE SEEEERRRRK SRRNRRKRSN RSRKKRRYSD SDEREDSESD DSDSSGRKKK KRSSSSKSRS KRIRRSRKRT
301: NRSPETEGEG SDLEEENGSG SGDAKSKTTV DEVMKTEINA EAIKLKELFE SQKKPALDNE PAVGPMPLPR AEGHISYGGA LRPGEGDAIA QYVQQGKRIP
401: RRGEVGLSAE EIQKFESLGY VMSGSRHQRM NAIRIRKENQ VYSAEDKRAL AMFNYEEKAK REHKVMADLQ RLVQRHIGQD VGPTHDPFAA KASDGADA
001: MTMNSLPRRF GKNHGYLDRD YRNGRRSGSD SDEELKGLSH EEYRRQKRLK MRKSAKFCFW ENTPSPPRDQ NEDSDENADE IQDKNGGERD DNSKGKERKG
101: KSDSESESDG LRSRKRKSKS SRSKRRRKRS YDSDSESEGS ESDSEEEDRR RRRKSSSKRK KSRSSRSFRK KRSHRRKTKY SDSDESSDED SKAEISASSS
201: GEEEDTKSKS KRRKKSSDSS SKRSKGEKTK SGSDSDGTEE DSKMQVDETV KNTELELDEE ELKKFKEMIE LKKKSSAVDE EEEEGDVGPM PLPKAEGHIS
301: YGGALRPGEG DAIAQYVQQG KRIPRRGEVG LNAEEIQKFE DLGYVMSGSR HQRMNAIRIR KENQVYSAED KRALAMFNYE EKAKREAKVM SDLQRLVQRH
401: MGEEVGPNHD PFGAGKTEED DD
101: KSDSESESDG LRSRKRKSKS SRSKRRRKRS YDSDSESEGS ESDSEEEDRR RRRKSSSKRK KSRSSRSFRK KRSHRRKTKY SDSDESSDED SKAEISASSS
201: GEEEDTKSKS KRRKKSSDSS SKRSKGEKTK SGSDSDGTEE DSKMQVDETV KNTELELDEE ELKKFKEMIE LKKKSSAVDE EEEEGDVGPM PLPKAEGHIS
301: YGGALRPGEG DAIAQYVQQG KRIPRRGEVG LNAEEIQKFE DLGYVMSGSR HQRMNAIRIR KENQVYSAED KRALAMFNYE EKAKREAKVM SDLQRLVQRH
401: MGEEVGPNHD PFGAGKTEED DD
Arabidopsis Description
AT4g02720/T10P11_1 [Source:UniProtKB/TrEMBL;Acc:Q8S9I4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.