Factsheet for HORVU5Hr1G068130.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G073850.1
HORVU3Hr1G073910.1
HORVU4Hr1G045160.2
HORVU4Hr1G067630.12
HORVU5Hr1G037500.1
HORVU6Hr1G058780.1
HORVU6Hr1G067760.8
HORVU7Hr1G097780.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02720.1	HORVU4Hr1G045160.2	AT1G08650.1	21798944
AT4G02720.1	HORVU5Hr1G037500.1	AT1G08650.1	21798944
AT4G02720.1	HORVU6Hr1G058780.1	AT1G08650.1	21798944
AT4G02720.1	HORVU6Hr1G067760.8	AT1G08650.1	21798944
AT4G02720.1	HORVU4Hr1G067630.12	AT4G17220.1	21798944
AT4G02720.1	HORVU7Hr1G097780.1	AT5G49400.1	21798944
AT4G02720.1	HORVU3Hr1G073850.1	AT5G61010.1	21798944
AT4G02720.1	HORVU3Hr1G073910.1	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G235300.1	Wheat	plastid	90.14	96.18
TraesCS5A01G237400.1	Wheat	plastid	89.61	95.24
TraesCS5D01G244100.1	Wheat	mitochondrion, nucleus, plastid	91.04	94.95
Os09t0455400-01	Rice	cytosol, mitochondrion, nucleus	12.37	92.0
HORVU5Hr1G068120.2	Barley	nucleus	77.06	89.58
CDX76672	Canola	nucleus	8.96	72.46
CDY11458	Canola	nucleus	8.96	72.46
CDY42264	Canola	nucleus	8.96	72.46
Zm00001d020706_P001	Maize	mitochondrion, nucleus, plastid	63.8	71.34
KXG35759	Sorghum	nucleus	65.23	70.68
CDX91311	Canola	cytosol	10.75	57.69
GSMUA_Achr9P15340_001	Banana	nucleus	45.7	53.8
CDY10535	Canola	nucleus	33.51	53.12
CDY21909	Canola	nucleus	33.33	52.39
CDY22074	Canola	nucleus	32.97	52.12
Bra007711.1-P	Field mustard	nucleus	27.6	51.16
Bra036246.1-P	Field mustard	nucleus	33.51	50.82
KRH32028	Soybean	nucleus	43.37	49.69
KRH71411	Soybean	nucleus	43.55	48.8
AT4G02720.1	Thale cress	nucleus	34.95	46.21
VIT_07s0151g00910.t01	Wine grape	nucleus	38.53	45.84
CDY70496	Canola	nucleus	29.75	45.48
CDY58145	Canola	nucleus	29.21	45.15
Bra032050.1-P	Field mustard	nucleus	29.39	43.04
PGSC0003DMT400097185	Potato	nucleus	40.14	41.71
CDY53463	Canola	nucleus	28.32	41.69
Solyc11g071660.1.1	Tomato	nucleus	39.25	40.93

Protein Annotations

EnsemblPlants:HORVU5Hr1G068130.1	EnsemblPlantsGene:HORVU5Hr1G068130	GO:GO:0003674	GO:GO:0003682	GO:GO:0005488	GO:GO:0006139
GO:GO:0007154	GO:GO:0007165	GO:GO:0007219	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:NKAP	PANTHER:PTHR13087	PANTHER:PTHR13087:SF0	PFAM:PF06047
SEG:seg	UniParc:UPI000B468AF5	UniProt:A0A287RMF0	MapMan:17.1.1.1.3	:	:

Description

No Description!

Coordinates

chrchr5H:+:516401712..516403639

Molecular Weight (calculated)

63536.3 Da

IEP (calculated)

10.447

GRAVY (calculated)

-1.524

Length

558 amino acids

Sequence
(BLAST)

001: TQIGSLFSPN RIPSPDLIGD PSVAMSRTGS RLASAVVRLP GRSRVSASPS PRRRSMSPSP SPRRQRRRDR SPIPSRDRRG ERSPVPSRDR RGERSPVPSR
101: DRRGERSPVP SRDRRRDRSP SPFRDRRRQW SPYHNERGRD MDRVRDVEPP ARRGGGGGGE WSASDDDDED LKGLTYFEYR RVKRQKLRKS LKKCIWKVTP
201: SPPRRDDEAD EYQYSEEEEE KKESPKKDSS DKSDEEKNKD SSESESDASG SLSDSSESDY SRKKKKGRKG RRSSSKRSRR AHRRHRKSDM ESESDSKDED
301: SEGSYDSEDS RDKKRSKRSW RHKKSKRRGR SSKRKKSKSL DVPSDASSEE VEVVGSSPIS TDSKKTGKSS RKKSSSQSDS EDSIPSDAII DEKEIEETDE
401: PEIDPEAIKF KEMLEAQKKA ALENEMPVGP MPLPRADGHI SYGGALRPGE GDAIAQYVQQ GKRIPRRGEV GLSADEIQKF EDLGYVMSGS RHQRMNAIRI
501: RKENQVYSAE DKRALAMFNY EEKSKREHKV MADLQRLVSR TIGQETGPSH DPFATTDD

Best Arabidopsis Sequence Match ( AT4G02720.1 )
(BLAST)

001: MTMNSLPRRF GKNHGYLDRD YRNGRRSGSD SDEELKGLSH EEYRRQKRLK MRKSAKFCFW ENTPSPPRDQ NEDSDENADE IQDKNGGERD DNSKGKERKG
101: KSDSESESDG LRSRKRKSKS SRSKRRRKRS YDSDSESEGS ESDSEEEDRR RRRKSSSKRK KSRSSRSFRK KRSHRRKTKY SDSDESSDED SKAEISASSS
201: GEEEDTKSKS KRRKKSSDSS SKRSKGEKTK SGSDSDGTEE DSKMQVDETV KNTELELDEE ELKKFKEMIE LKKKSSAVDE EEEEGDVGPM PLPKAEGHIS
301: YGGALRPGEG DAIAQYVQQG KRIPRRGEVG LNAEEIQKFE DLGYVMSGSR HQRMNAIRIR KENQVYSAED KRALAMFNYE EKAKREAKVM SDLQRLVQRH
401: MGEEVGPNHD PFGAGKTEED DD

Arabidopsis Description

AT4g02720/T10P11_1 [Source:UniProtKB/TrEMBL;Acc:Q8S9I4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.