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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • extracellular 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000236.1-P Field mustard mitochondrion 98.55 99.51
CDY22536 Canola mitochondrion, plasma membrane 97.85 98.22
AT2G41700.1 Thale cress mitochondrion, plasma membrane 92.04 90.97
GSMUA_AchrUn_... Banana cytosol 5.11 79.17
VIT_08s0007g08730.t01 Wine grape mitochondrion, plasma membrane 73.33 72.51
KRH66908 Soybean cytosol 67.15 68.4
Solyc03g113080.2.1 Tomato cytosol 6.56 34.08
CDY62594 Canola cytosol 7.42 30.2
CDY64180 Canola plasma membrane 9.73 28.87
CDX94927 Canola cytosol 1.83 28.57
CDX68439 Canola nucleus 2.42 28.48
CDY02116 Canola plasma membrane 12.58 27.86
CDY23043 Canola cytosol, mitochondrion 7.58 27.54
CDY02120 Canola cytosol, nucleus, plasma membrane 9.52 26.86
CDY23042 Canola plasma membrane 13.44 26.68
CDY23040 Canola plasma membrane 13.6 26.52
CDY52820 Canola cytosol, nucleus, plasma membrane 12.47 26.42
CDY23800 Canola plasma membrane 12.96 26.34
CDY24159 Canola golgi, mitochondrion 13.23 26.25
CDY31786 Canola cytosol, nucleus, plasma membrane 9.3 26.21
CDX68434 Canola plasma membrane 9.95 26.06
CDY36933 Canola golgi, mitochondrion 13.49 26.01
CDY02118 Canola plasma membrane 13.49 25.23
CDY01873 Canola cytosol 3.28 23.11
CDX96058 Canola cytosol 3.28 23.11
CDX68440 Canola cytosol, mitochondrion 1.72 23.02
CDY62599 Canola plasma membrane 10.59 22.67
CDY58413 Canola cytosol, plastid 3.33 22.63
CDX69605 Canola plastid 3.33 22.63
CDX68435 Canola mitochondrion, plastid 3.06 21.84
CDY02114 Canola plasma membrane 10.16 21.31
CDY23039 Canola plasma membrane 10.11 21.17
CDY21797 Canola plasma membrane 10.11 20.8
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 9.89 20.77
CDX77874 Canola plasma membrane 9.25 20.75
CDY57805 Canola plastid 3.66 20.67
CDY16404 Canola plastid 3.66 20.67
CDY24156 Canola plasma membrane 10.38 20.49
Solyc03g113070.2.1 Tomato plasma membrane 6.34 20.49
CDY24158 Canola plasma membrane 10.16 20.41
CDY36930 Canola plasma membrane 10.32 20.38
CDX83025 Canola plasma membrane 10.32 20.38
CDX68441 Canola plasma membrane 10.27 20.28
CDY39546 Canola plasma membrane 10.11 20.11
CDX77421 Canola plasma membrane 10.05 20.0
CDY36931 Canola plastid 9.68 19.33
CDY23798 Canola nucleus, peroxisome, plasma membrane 3.98 19.27
CDY24157 Canola plastid 9.68 18.93
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 3.66 18.63
CDY62596 Canola cytosol, plasma membrane, vacuole 2.96 17.92
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 3.71 16.2
CDY39288 Canola cytosol 1.61 15.15
CDX68436 Canola plasma membrane 2.26 14.29
CDY24573 Canola plasma membrane 1.08 12.58
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 1.18 12.29
CDY23799 Canola cytosol, peroxisome, plasma membrane 1.18 10.78
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078HF31UniProt:A0A078HF31InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY35403ProteinID:CDY35403ProteinID:CDY35403.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00058390001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF36SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDDEA8SEG:seg::
Description
BnaA03g19570DBnaA03g19570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF31]
Coordinates
chrLK032351:+:168354..180440
Molecular Weight (calculated)
206667.0 Da
IEP (calculated)
6.640
GRAVY (calculated)
0.125
Length
1860 amino acids
Sequence
(BLAST)
0001: MGTWRRQLKA MLRKNWLLKT RHPFVTSAEI LLPTVVMLLL IAVRTRVDTT IHPARSNIEK DTVVQVGEGI SPSFPQVLEL LLAEGEFLAF APDTDETNNM
0101: IDILSLKFPD LRLVTRIFKD DVELETYITS AHYAVCSDVR NCSNPKLKGA VVFHEQGPHV YDYSIRLNHT WALAGFPNVK SIMDTNGPYI NDLEMGINTI
0201: PTMQYSFSGF LTLQQVVDSF IIFASQQNMD LPSSHASLGS ALSLEMPWTM FSPSKIRMVP FPTREYTDDE FQSIVKSVMG LLYLLGFLFP ISRLISYSVF
0301: EKEQKIREGL YMMGLKDEIF HLSWFITYAL QAVRIVRWDY YSFSIMLSFL ISTFFTRAKT AVAVGTLAFL GAFFPYYTVN DESVSMYVYP LFWVLKVVAS
0401: LLSPTAFALG SINFADYERA HVGLRWSNIW LASSGVSFFV CLLMMLLDSI LYCAIGLYLD KVLPRENGVR YPWNFIFNKC FGRKKNNQYC IPGLNTNIEG
0501: TQGEPFDPVI ESISLEMRQQ ELDGRCIQIK NLHKVFASGR GNCCAVNSLR LTLYENQILS LLGHNGAGKS TTISMLVGLL PPTSGDALIL GNSIVTNMDE
0601: IRKELGVCPQ HDILFPELTV REHLEMFAVL KGVKEDSLKS TVTDMAEEVG LSDKINTLVR ALSGGMKRKL SLGIALIGNS KVIILDEPTS GMDPYSMRLT
0701: WQLIKKIKKG RIILLTTHSM DEAEELGDRI GIMANGSLKC CGSSMFLKHH YGVGYTLTLV KTSPAVSVAA HIVHRHIPSA TCVSEVGNEI SFKLPLASLP
0801: CFENMFREIE SCMKSSVDRS RISEIEDSDY PGIQSYGISV TTLEEVFLRV AGCNLDIEDK QEDTFASPDT EASLVCIESV QKSTIQPKLL ASCNEGAGVI
0901: ITSIAKACRL IVAAVWAFIG FISMQCCGCS VISRSMFWRH CKALFIKRAR SAFRDRKTVA FQLIIPAVFL LFGLLLLQLK PHPDQKSITL TTAYFNPLLS
1001: GNGGGGPIPY DLSEPIAKEV AEYIEGGWIQ PLRNSSYKFP NPKEALADAI DAAGPTLGPT LLSMSEFLMS SFDQSYESRY GAVLMDSQHP DGSVGYTVLH
1101: NSTCQHAGPI YINVMHSALL RLASGNKNMS IQTRNHPLPP TKTQRLQRHD LDAFSAAIIV SIAFSFIPAS FAVPIVKERE VKAKHQQLIS GVSVLSYWLS
1201: TYVWDFVSFL FPSTFAIILF YAFGLEQFIG IGRFLPTVLM LLEYGLAIAS STYCLTFFFT EHSMAQNVIL MVHFFSGLIL MVISFVMGLI PATVNANSYL
1301: KTFFRLSPGF CFSDGLASLA LLRQGMKDKS SHGVFDWNVT GASISYLALE SIFYFLLTLG LELLPVQKMM SFSIGEWWQN FKVFKQGAGS SSTEPLLKDS
1401: TGAISADMED DIDVQEERNR VISGLTDNTI FYLQNLRKVY PGSNHHGPKV AVQSLTFSVQ AGECFGFLGT NGAGKTTTLS MLSGEETPTS GTAFVFGKDI
1501: VASPKAIRQH IGYCPQFDAL FEYLTVKEHL ELYARIKGVV DYRIDNVVME KLVEFDLLKH SHKPSFTLSG GNKRKLSVAI AMIGDPPIVI LDEPSTGMDP
1601: VAKRFMWDVI SRLSTRSGKT AVILTTHSMN EAQALCTRIG IMVGGRLRCI GSPQHLKTRF GNHLELEVKP NEVSHVDLEN LCQMIQQWLF NVPSQPRSLL
1701: GDLEVCIGVS DSITPDTASA SEISLSPEMI QSIAKYLGNE QRVSTLVPPM PEEDVGFDEQ LSEQLFRDGG IPLPIFAEWW LTKEKFSALD SFIQSSFPGA
1801: TFKSCNGLII KYQLPFGEGG LSLADAFGHL ERNRNRLGIA EYSISQSTLE TIFNHFAANS
Best Arabidopsis Sequence Match ( AT2G41700.1 )
(BLAST)
0001: MGSSKRQFKA MLRKNWLLKT RHPFVTSAEI LLPTIVMLLL IAVRTRVDTT IHPAHSNIDK DTVVEVGKGN SPSFPEVLKL LLAEGDFLAF APDTDETNNM
0101: IDILSLKFPE LRLVTKIFKD DIELETYITS AHYGVCSEVR NCSNPKIKGA VVFHEQGPHL FDYSIRLNHT WAFAGFPNVK SIMDTNGPYI NDLEMGINTI
0201: PTMQYSFSGF LTLQQVVDSF IIFASQQNND LPLSHSNLSS ALRFELPWTL FSPSVIRMVP FPTREYTDDE FQSIVKSVMG LLYLLGFLFP ISRLISYSVF
0301: EKEQKIREGL YMMGLKDEIF HLSWFITYAL QFALCSGIIT ACTMGSLFKY SDKTLVFTYF FLFGLSAIML SFMISTFFTR AKTAVAVGTL TFLGAFFPYY
0401: TVNDESVSMV LKVVASLLSP TAFALGSINF ADYERAHVGL RWSNIWRASS GVSFFVCLLM MLLDSILYCA LGLYLDKVLP RENGVRYPWN FIFSKYFGRK
0501: KNNLQNRIPG FETDMFPADI EVNQGEPFDP VFESISLEMR QQELDGRCIQ VRNLHKVYAS RRGNCCAVNS LQLTLYENQI LSLLGHNGAG KSTTISMLVG
0601: LLPPTSGDAL ILGNSIITNM DEIRKELGVC PQHDILFPEL TVREHLEMFA VLKGVEEGSL KSTVVDMAEE VGLSDKINTL VRALSGGMKR KLSLGIALIG
0701: NSKVIILDEP TSGMDPYSMR LTWQLIKKIK KGRIILLTTH SMDEAEELGD RIGIMANGSL KCCGSSIFLK HHYGVGYTLT LVKTSPTVSV AAHIVHRHIP
0801: SATCVSEVGN EISFKLPLAS LPCFENMFRE IESCMKNSVD RSKISEIEDS DYPGIQSYGI SVTTLEEVFL RVAGCNLDIE DKQEDIFVSP DTKSSLVCIG
0901: SNQKSSMQPK LLASCNDGAG VIITSVAKAF RLIVAAVWTL IGFISIQCCG CSIISRSMFW RHCKALFIKR ARSACRDRKT VAFQFIIPAV FLLFGLLFLQ
1001: LKPHPDQKSI TLTTAYFNPL LSGKGGGGPI PFDLSVPIAK EVAQYIEGGW IQPLRNTSYK FPNPKEALAD AIDAAGPTLG PTLLSMSEFL MSSFDQSYQS
1101: RYGSILMDGQ HPDGSLGYTV LHNGTCQHAG PIYINVMHAA ILRLATGNKN MTIQTRNHPL PPTKTQRIQR HDLDAFSAAI IVNIAFSFIP ASFAVPIVKE
1201: REVKAKHQQL ISGVSVLSYW LSTYVWDFIS FLFPSTFAII LFYAFGLEQF IGIGRFLPTV LMLLEYGLAI ASSTYCLTFF FTEHSMAQNV ILMVHFFSGL
1301: ILMVISFVMG LIPATASANS YLKNFFRLSP GFCFSDGLAS LALLRQGMKD KSSHGVFEWN VTGASICYLG LESIFYFLVT LGLELMPVQK VMSFSIGEWW
1401: QNLKAFKQGA GSSSTEPLLK DSTGAISTDM EDDIDVQEER DRVISGLSDN TMLYLQNLRK VYPGDKHHGP KVAVQSLTFS VQAGECFGFL GTNGAGKTTT
1501: LSMLSGEETP TSGTAFIFGK DIVASPKAIR QHIGYCPQFD ALFEYLTVKE HLELYARIKG VVDHRIDNVV TEKLVEFDLL KHSHKPSFTL SGGNKRKLSV
1601: AIAMIGDPPI VILDEPSTGM DPVAKRFMWD VISRLSTRSG KTAVILTTHS MNEAQALCTR IGIMVGGRLR CIGSPQHLKT RYGNHLELEV KPNEVSNVEL
1701: ENFCQIIQQW LFNVPTQPRS LLGDLEVCIG VSDSITPDTA SASEISLSPE MVQRIAKFLG NEQRVSTLVP PLPEEDVRFD DQLSEQLFRD GGIPLPIFAE
1801: WWLTKEKFSA LDSFIQSSFP GATFKSCNGL SIKYQLPFGE GGLSLADAFG HLERNRNRLG IAEYSISQST LETIFNHFAA NS
Arabidopsis Description
ABCA1ABC transporter A family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84M24]
SUBAcon: [plasma membrane,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.