CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02120	Canola	cytosol, nucleus, plasma membrane	74.22	97.88
CDY31786	Canola	cytosol, nucleus, plasma membrane	73.99	97.42
CDY23798	Canola	nucleus, peroxisome, plasma membrane	38.55	87.24
AT5G61700.1	Thale cress	plasma membrane	87.34	82.77
CDX94927	Canola	cytosol	11.28	82.35
CDY23043	Canola	cytosol, mitochondrion	47.3	80.27
CDY02119	Canola	endoplasmic reticulum, plasma membrane, plastid	15.19	73.74
CDY02114	Canola	plasma membrane	74.22	72.72
CDY23039	Canola	plasma membrane	73.88	72.3
CDY23799	Canola	cytosol, peroxisome, plasma membrane	15.42	65.69
CDY36930	Canola	plasma membrane	68.7	63.38
CDY24156	Canola	plasma membrane	68.24	62.95
CDX83025	Canola	plasma membrane	68.01	62.74
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	63.64	62.42
CDY24158	Canola	plasma membrane	66.28	62.2
CDX68441	Canola	plasma membrane	67.2	62.0
KRH54520	Soybean	plasma membrane, plastid	56.62	60.97
CDX68440	Canola	cytosol, mitochondrion	9.67	60.43
CDY36931	Canola	plastid	63.06	58.86
CDX77421	Canola	plasma membrane	62.95	58.5
CDY39546	Canola	plasma membrane	62.72	58.29
Solyc03g113040.2.1	Tomato	plastid	62.83	57.78
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	42.35	57.68
KRH63384	Soybean	plasma membrane	48.1	57.42
CDY24157	Canola	plastid	62.83	57.41
Solyc03g113060.2.1	Tomato	extracellular	60.87	56.04
KRH56933	Soybean	plasma membrane, plastid	60.53	55.43
CDY21797	Canola	plasma membrane	57.65	55.42
CDX77874	Canola	plasma membrane	52.36	54.89
KRH03450	Soybean	plasma membrane, plastid	59.84	54.51
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	30.49	53.97
CDY24573	Canola	plasma membrane	9.67	52.83
TraesCS7A01G367700.1	Wheat	plasma membrane	34.52	52.82
TraesCS1B01G356200.1	Wheat	plasma membrane	56.39	51.47
KXG25097	Sorghum	plasma membrane	56.62	51.36
TraesCS1A01G343000.1	Wheat	plasma membrane	56.27	51.31
Solyc06g070950.1.1	Tomato	plasma membrane	52.59	51.29
TraesCS1D01G345200.1	Wheat	plasma membrane	56.16	51.26
Os08t0398300-01	Rice	plasma membrane	56.16	50.99
HORVU1Hr1G075620.5	Barley	plasma membrane	55.58	50.63
HORVU4Hr1G087670.8	Barley	mitochondrion	55.93	50.62
Zm00001d050259_P002	Maize	plasma membrane	56.96	50.3
OQU89360	Sorghum	plasma membrane	53.05	48.63
TraesCS5D01G195700.1	Wheat	plasma membrane	52.93	48.63
TraesCS4B01G365000.1	Wheat	plasma membrane	55.01	48.58
TraesCS5A01G193200.1	Wheat	plasma membrane	52.82	48.52
Zm00001d020208_P003	Maize	plasma membrane	52.7	48.31
TraesCSU01G138200.1	Wheat	plasma membrane	54.66	47.6
TraesCS5B01G188600.1	Wheat	plasma membrane	51.78	47.37
TraesCS5A01G534100.3	Wheat	cytosol	54.89	47.23
TraesCS3D01G368700.2	Wheat	plasma membrane	52.13	46.8
HORVU5Hr1G056930.20	Barley	plasma membrane	52.59	46.78
TraesCS7D01G355100.1	Wheat	plastid	51.32	46.7
Os06t0589300-01	Rice	plasma membrane	50.98	46.68
TraesCS7B01G260800.1	Wheat	plastid	51.32	46.65
EER89983	Sorghum	plastid	51.21	46.65
CDX68439	Canola	nucleus	8.4	46.2
Zm00001d036927_P001	Maize	plasma membrane, plastid	51.09	46.01
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	50.86	44.6
GSMUA_Achr7P23890_001	Banana	plasma membrane	59.49	44.19
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.52	43.9
GSMUA_Achr3P20510_001	Banana	plasma membrane	58.0	42.97
Solyc06g070930.2.1	Tomato	plastid	10.93	34.67
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	6.1	31.55
HORVU4Hr1G039510.1	Barley	cytosol	5.87	30.36
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	5.87	30.36
CDY62594	Canola	cytosol	12.77	24.29
CDY64180	Canola	plasma membrane	17.38	24.08
CDY16404	Canola	plastid	9.09	24.01
CDY57805	Canola	plastid	8.86	23.4
CDY24159	Canola	golgi, mitochondrion	25.2	23.37
CDY58413	Canola	cytosol, plastid	7.36	23.36
CDX69605	Canola	plastid	7.36	23.36
CDX96058	Canola	cytosol	7.02	23.11
CDY01873	Canola	cytosol	7.02	23.11
CDY02116	Canola	plasma membrane	22.21	22.98
CDY36933	Canola	golgi, mitochondrion	25.2	22.69
CDY23042	Canola	plasma membrane	24.17	22.41
CDY23800	Canola	plasma membrane	23.59	22.4
CDY23040	Canola	plasma membrane	24.51	22.33
CDY52820	Canola	cytosol, nucleus, plasma membrane	22.44	22.21
CDY02118	Canola	plasma membrane	24.17	21.11
CDX68434	Canola	plasma membrane	17.15	20.99
CDX68435	Canola	mitochondrion, plastid	5.87	19.54
CDY02115	Canola	extracellular, mitochondrion, plasma membrane, plastid	7.94	18.9
CDX68436	Canola	plasma membrane	6.33	18.71
CDY62596	Canola	cytosol, plasma membrane, vacuole	6.21	17.59
CDY39288	Canola	cytosol	3.45	15.15
CDY35403	Canola	mitochondrion, plasma membrane	22.67	10.59
CDY22536	Canola	mitochondrion, plasma membrane	22.55	10.58

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	GO:A0A078JA50	UniProt:A0A078JA50	InterPro:AAA+_ATPase	InterPro:ABCA
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY62599	ProteinID:CDY62599	ProteinID:CDY62599.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00036435001	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EDE222	SEG:seg	:	:

Description

BnaCnng40510DBnaCnng40510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JA50]

Coordinates

chrLK034166:-:31328..35627

Molecular Weight (calculated)

96087.8 Da

IEP (calculated)

8.554

GRAVY (calculated)

0.025

Length

869 amino acids

Sequence
(BLAST)

001: MADPSPASFG TQANALLRKN LTYQRKHIWT NVRLILVPLF LCLILLAIQH VLDALMKGVS DMTGDCKSNA DLSGGICPIQ NPPMLPAMLQ IPQHELRSVK
101: TDFLPYKDLP DKSCRGTMGG SCPVTILMTG DKQPLGKAIS ANIFATSFAV NSSDLLPTLA NNILGSPIAA DKDNYADPGL APGLPIYSIQ PLCSANSTWP
201: LSLEKIQTEV KCVQGLCLWR NNSADVNNEL FKGSYRGNPA GITNEIAAAY DLMSTDKKNF NVTIWYNSTY KEEFSTGPVK LVRVPRSINL ISNAYLKFLK
301: GPGLRILFEF VKEVPKHATR LNTDIASLLG PLFFTWVVLL LFPVILTSLV YEKQERLRIM MKMHGLGDGL KYFRLNSYTI QSVFYFIYLN LQIAIGFLVS
401: SIFSKVKTVT VVAYILVYGT GLLGSFLFQT MLENQSFPEE WIVALELYPG FSLYRGLYEF SQYASRGNGM KWQDLSDSGM GEVLCIMSIE WFLALIIAFY
501: IDQVFSSGKH PFFFLNPFKK SSSIPSKPTV QRVDSKKVSI DMGKIDVSQE REKVQQLRNE GSAGHAILCD NLKKVYPGEC FGMLGPNGAG KTSFISMMTG
601: LLKPSSGTAL VQGLDICKEM NKVYTSMGVC PQHDLLWETL TGREHLLFYG RLKNIKGSAL TQAVEESLKS VSLFDGGVGD KPAGNYSGGM KRRLSVAISL
701: IGNPKVVYLD EPSTGLDPAS RKNLWDVIQC AKQNTAIILT THSMEEAEFL CDRLGIFVDG ALQCIGNSKE LKSRYGGSYV FTMTTSSEHE EDVERLVSTV
801: SPNAKKVYHL AGTQKFELPK QEVRIAEVFR AVEKAKSNFT VFAWGLSDTT LEDVFIKVAK SAQAFISLS

Best Arabidopsis Sequence Match ( AT5G61700.1 )
(BLAST)

001: MVNPSPASFW TQANALLRKN LTYQRKHIWT NVRLILVPLF LCLILLAIQQ VLDALMKGVS DMSNCGGNVT LPGGICPIPN PPSLPPMLQI PQHELRSVKT
101: DFFSYKDLPD KLCRETGSCP VTILFTGDKL PLGKALSANI FSTSFVVNSS DLLPTLANNV LGSTEAAGED NYEDPGIASD LPIYSIQPSC SANSTWPLSL
201: GQIQTAVKCV QGLCLWRNNS VEVNDELFKG SWRGNPAGMP NEIVAAYDLM STDRKNFNVT IWYNSTYNDE FATGQALKLV RVPRSINLIS NAYLKFLKGP
301: GTRILFEFLK EVPKEETKMN QDIASLLGPL FFTWVVLLLF PVILTSLVYE KQERLRIIMK MHGLGDGPYW MISYAYFLTI SMLYVISLVG FGSAIGLKYF
401: RRNDYSIQFV FYFIYSNLQI SLAFLVSSIF SKVKTVTVIA YILVYGTGLL GSFLFQKMIE TQSFPEEWIL AMELYPGFSL YRGLYEFSQY ASRGNGMKWQ
501: DLSDSGMGEV FCIMSVEWFL ALIVAYYIDQ VFTSGKHPFF FLVNLFKSPS SLPRRPTVQR LDSKRVFIDM DKHDVTQERE SVQKLRNEGS TGHAILCDNL
601: KKVYPGRDGN PPKMAVRGLY LSVSSGECFG MLGPNGAGKT SFISMMTGLL KPSSGTALVQ GLDICKDMNK VYTSMGVCPQ HDLLWETLTG REHLLFYGRL
701: KNIKGSDLTQ AVEESLKSVS LYDGGVGDKP AGNYSGGMKR RLSVAISLIG NPKVVYLDEP STGLDPASRK NLWNVIKRAK QNTAIILTTH SMEEAEFLCD
801: RLGIFVDGGL QCIGNSKELK SRYGGSYVFT MTTSSKHEEE VERLVESVSP NAKKIYHLAG TQKFELPKQE VRIAEVFRAV EKAKANFTVF AWGLADTTLE
901: DVFIKVARTA QAFISLS

Arabidopsis Description

ABCA12ABC transporter A family member 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.